Bacillus freudenreichii: NCTC4823_01013
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Entry
NCTC4823_01013 CDS
T06767
Symbol
sigL
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
bfd
Bacillus freudenreichii
Pathway
bfd02020
Two-component system
bfd02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NCTC4823_01013 (sigL)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC4823_01013 (sigL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfd03021
]
NCTC4823_01013 (sigL)
Transcription machinery [BR:
bfd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC4823_01013 (sigL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_3
LacI
HTH_31
HTH_17
Methyltransf_23
HTH_12
HTH_IclR
HTH_15
Motif
Other DBs
NCBI-ProteinID:
VEF47016
LinkDB
All DBs
Position
1:1084057..1085397
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AA seq
446 aa
AA seq
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MKLEPALLQKQTLNLTMTQELQQAITILQYTAHELTAFLESKEMENPLIQLESPIVRSVD
PRYDRVRKRKVTNPENDQKKWLEQMAEPTEGLADHLFSQLVMKALSDFQEKLVEQFIYNL
DPNGYLTITVDEAADACGTTIEEAEEILQLVQSLEPAGVAARSLQECLILQVERRQDVPP
LAVKLLTEYFNEFAEKKWKLLSDNLSVSLQEIQQAADFITTLDPRPGTHFDYERPQYVIP
DLILEIVDGKLELQLFERHLPAIRYQSDYYNEMSSIADDKVKQYLNDKRQDFRWIMRSIE
QRKQTLMKVGMAILEEQQDFFLKGPKYLKPLTLKDVAEKIEVHESTVSRAIRGKYIQTPS
GMHELKKFFSQALQSNAASDGEQASAGQAKALIKGLIDKEDKSKPLSDQAIANMLKEKGL
TLSRRTVAKYREQLRIPSSTKRKRYE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggaaccagctttgttgcagaagcagactttaaatttaacgatgacacaggaa
ttgcagcaggcgattacgatattacaatataccgcccatgaattgacagcttttctggaa
tcgaaagaaatggaaaatccgctcatacagctagaatcaccgatcgttcgatctgttgat
ccccgctacgacagagtgaggaaaagaaaagtcacgaatcctgaaaatgaccaaaaaaaa
tggctggagcaaatggctgagcccactgaggggcttgcagatcacttgttttctcagctc
gtgatgaaagcgctgtccgattttcaggaaaaattggtggaacagttcatatataatcta
gatccgaatggatatttgacgataacagtcgatgaagctgcggatgcatgcggcacaacg
attgaagaggcagaagagatccttcagcttgttcaaagccttgaacctgcgggagtagca
gcaaggtcgctgcaggaatgcctgatattgcaagtggaaagaagacaggatgtaccccca
ttagctgtcaagttattaactgaatatttcaatgaatttgcggagaaaaagtggaaactt
ctatcggataatctgtctgtcagtttgcaagagatccagcaggcagccgatttcattaca
actctggacccgcggccagggacacattttgactacgagagaccacaatacgtcattccc
gacctcattcttgaaatcgttgatgggaagttggaactgcaattgtttgaaagacatttg
ccggccattcgttatcaatccgattactataatgaaatgtcaagcattgcggatgataaa
gtgaagcaatacttgaatgataaacgccaggacttccgctggatcatgcgcagcatcgag
cagagaaagcagacgctgatgaaagtggggatggcgatcctcgaagaacagcaggacttc
tttttaaaggggccaaagtatctcaagccattgacgttaaaagatgtcgcggaaaaaatt
gaggtgcatgagtcgactgtcagccgtgccatcagaggtaaatatattcaaacgcctagc
ggtatgcatgagctaaagaagttcttctcacaagcacttcaatcgaatgcagccagcgac
ggtgaacaggcatcggctggccaggcgaaagccctgatcaaaggactcattgataaagag
gataaaagcaaaccgttgtccgatcaagccatcgccaacatgttaaaagagaaagggctt
accttatcaaggagaactgttgccaaatacagggagcagctgcgaataccttcatcaacg
aaaaggaagcggtacgagtaa
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