Bacillus freudenreichii: NCTC4823_01106
Help
Entry
NCTC4823_01106 CDS
T06767
Name
(GenBank) putative sigma-54 specific transcriptional regulator
Organism
bfd
Bacillus freudenreichii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
PAS_4
PAS_8
HTH_50
AAA_5
Diguanyl_cycl_sensor
AAA
Mg_chelatase
AAA_2
PAS_GdpP
HTH_8
AAA_22
nSTAND3
NTPase_1
MCM
AAA_7
AAA_16
ATPase
AAA_3
TMF_DNA_bd
Motif
Other DBs
NCBI-ProteinID:
VEF47109
LinkDB
All DBs
Position
1:complement(1181403..1183100)
Genome browser
AA seq
565 aa
AA seq
DB search
MLESAKLQQYEDVFNKLPIGVLVIAANGLITVCNQTAAELIGLAVPKIINQPFSGIIPLN
KLPSDNTYHEQQILINNRSFSFSAKKDNELQQTIFTIHPTEPMKELRDTKLTDLPIEDIL
NSSQDEIFITDSEGRTLFVNSAGKALYGKKPEDIIGNAVNQLVKKGLFSPSLFPVVKKRN
EKVSMIQRTISGKTAHVIANPVFDEDGNMTHIIFTGRDITEIKNLRKKIERSEVLLNAYK
SELEKLQGFNTPPETDIVAISPKMRKVLNMANKIAKVDSTILITGESGVGKGVIAKFIHD
NSPRKNNPVIHINCGAIPENLMESELFGYESGAFTGADKKGRKGLIEQANGGTLFLDEIG
EMPLNLQVKLLKVLQERKFEPVGSSASVEVDIRIIAATNKNLKELINKGTFREDLYYRLN
VVPIHIPPLRERPEDVLHLIDFFAEKMKDKYHTSTTFSLEAENALVQYHWPGNVRELENL
IERLVVTSENDEIIFDDLPEEVRYREANDDIVIVKDIAPLKQVRDEMEKQLIRKAYEVHK
SSYKVAELLGIDQSTASRKINKFIK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaaagcgccaaacttcaacaatatgaggatgtttttaataaactgccaataggc
gtcttggttattgctgcaaatggactgatcacagtatgtaatcagacagctgcggaatta
attggacttgccgtaccgaaaatcatcaatcagcctttttcaggaataattcctttaaat
aaattgccctctgataatacttatcatgaacaacaaattttgattaataatagatctttt
tcattttccgccaagaaagataatgaacttcagcaaactatattcaccattcaccctacg
gaacctatgaaggagctaagggatacaaaactaacagatctgccaattgaagatattctc
aattcttcacaagatgaaatattcattacggattctgaaggacgtactctgtttgtcaac
tcagctggaaaagctctttatggaaaaaagcctgaagatattattggcaatgctgtcaac
cagcttgttaaaaaaggacttttctctccttccctttttccggttgttaaaaaacgaaat
gaaaaagtgtccatgatccagcggacaatttcagggaaaaccgcacatgtcatcgccaat
cctgtatttgacgaggatggcaacatgacacatatcatttttaccggaagagatattact
gagattaagaacttgagaaaaaagattgaaagaagcgaagttttattaaatgcatataaa
tccgaattggaaaaacttcaaggttttaacactcctcctgaaacagacattgtcgccatt
tctcccaagatgcgcaaggtgctcaatatggcgaataaaatagctaaagtagattcaacg
atattgattacaggtgaatcaggtgtcggaaaaggagtaatcgccaagttcatccatgat
aatagcccgcgtaaaaacaatccggtcattcatataaattgtggtgccataccggaaaac
ctcatggaatctgagttatttggttatgagagcggagcctttacgggagcggataaaaaa
ggcagaaaagggcttatagaacaagccaatggaggaacgctttttttagatgaaataggt
gaaatgcctcttaatctgcaagtgaagttgttgaaagttttgcaagagcggaaatttgaa
ccagtaggcagttcagcttccgtggaagtggacatacgaattattgccgctacaaataaa
aatttaaaagaactcataaacaaaggtacttttcgcgaggatttgtactatagattaaat
gtcgttccaatccatattcctccgctcagagaaagaccggaggacgtcctccatctaatt
gattttttcgcggaaaaaatgaaggacaaatatcatacatccactaccttttctttggaa
gcagagaacgcacttgttcaataccactggccaggaaacgtaagggaattggaaaattta
atcgagcggcttgttgtgacttctgaaaacgatgaaataatctttgatgacttacccgag
gaagttcggtacagggaggccaacgatgacatcgtcatcgtgaaggatattgcacccctt
aagcaagtaagagatgagatggaaaagcaattaatccgaaaagcctacgaagttcataag
agctcatataaagttgcagaattgcttggtatcgaccagtcgacggcaagcagaaaaatt
aataaatttattaaataa
DBGET
integrated database retrieval system
