Bacillus freudenreichii: NCTC4823_01256
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Entry
NCTC4823_01256 CDS
T06767
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfd03016
]
NCTC4823_01256 (ligT)
Enzymes [BR:
bfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
NCTC4823_01256 (ligT)
Transfer RNA biogenesis [BR:
bfd03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
NCTC4823_01256 (ligT)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
2H-SAK
Motif
Other DBs
NCBI-ProteinID:
VEF47230
LinkDB
All DBs
Position
1:1314952..1315515
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AA seq
187 aa
AA seq
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MHSSHYFFAMTLPDDVKAHLSKISERLKVDFPFKSWVHRDDYHITLAFLGNADQRRLAEA
ASNVKGALKDCQSFQVALNQAGTFGRTDSPRILWVNTTESSSLSGVRDKVYTACERAGFE
LETRPFKPHITLARKWTGQGGFQSLSVKESLASLLPGSIFTLEEVTLYRTRLDRTPKYEK
VESFKLI
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcattcaagccactacttctttgcaatgacattgccagatgatgttaaagcccattta
tcaaaaatcagcgagcggttaaaagttgactttccctttaaaagctgggttcatcgtgat
gattaccatatcacgctggcttttttgggtaatgctgatcaacgccgtcttgccgaggcc
gcgtcaaatgtaaaaggagcattgaaagattgtcaatcatttcaagtggccttgaatcag
gcgggtacgttcgggcgtacggattccccaagaattctttgggtgaatacgactgaaagt
tcttcattgtcgggagtgagggacaaggtctatacagcctgtgaacgagccggttttgag
ctggagacaagaccatttaaaccgcatatcactctcgcaaggaagtggacggggcagggg
ggattccaaagcctatccgtcaaggaaagcctggcatccctgcttccggggtccattttt
acgttggaggaagtgacattatacagaacccgtcttgacagaactccaaaatatgaaaaa
gtagagtcttttaagctcatctag
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