Bacillus freudenreichii: NCTC4823_01376
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Entry
NCTC4823_01376 CDS
T06767
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03030
DNA replication
bfd03410
Base excision repair
bfd03420
Nucleotide excision repair
bfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC4823_01376 (polA)
03410 Base excision repair
NCTC4823_01376 (polA)
03420 Nucleotide excision repair
NCTC4823_01376 (polA)
03440 Homologous recombination
NCTC4823_01376 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfd03032
]
NCTC4823_01376 (polA)
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_01376 (polA)
Enzymes [BR:
bfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC4823_01376 (polA)
DNA replication proteins [BR:
bfd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC4823_01376 (polA)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC4823_01376 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC4823_01376 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Imm50
HHH
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
VEF47347
LinkDB
All DBs
Position
1:1445020..1447668
Genome browser
AA seq
882 aa
AA seq
DB search
MGKSTKKLMLIDGNSVAYRAFFALPLLHNEKGIYTNAVYGFTTMLMKVLEEEKPTHILVA
FDAGKTTFRHKTYKEYKGGRQKTPPELSEQFPYVRELLDAYGIKRYELENYEADDIIGTL
AVEAEKDGYEVKVISGDKDLTQLSSDHITVGITRKGITDIENYTPEHIMEKYGLTPEQII
DMKGLMGDQSDNIPGVPGVGEKTAIKLLKEFGTLEKLLESIDKVSGPKLKERLQENKEQA
VMSKELATISKETPVEIPIEELLYEGYNPSNLRVLFQELEFNSLLGKLEGGEEESEEAAD
ENEAIEFQTVESIDEGIFTEQMALYVEILEDNYHTGTIAGFGLSSEKGNVFLPAEAALQS
EAFKNWAEDETKKKHVYDGKRSIVSLRKHGVALKGIDFDLLLVSYLLNPSESTTDFAGVA
KRHGYTNVQTDEAVYGKGAKKKVAEGDILAEHLAKKALGIVSLYQPLLDELEKNELIDLF
YDLELPLSFILADMEYTGIKVDIDRLKEMKAEMAERLKQIEEKIYGFAGEKFNINSPKQL
GVILFEKLGLPVIKKTKTGYSTAADVLEKLAPSHEIIEEILNYRQLGKLQSTYIEGLLKV
VHKGPDKVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRQAFIPSHEDWVIFAADY
SQIELRVLAHIAEDDKLMDAFRNDMDIHTKTAMDVFHVSREEVTSNMRRQAKAVNFGIIY
GISDYGLSQNLGITRKEAGTFIERYLESFPGVRNYMKDIVMEAKQNGYVSTLLHRRRYIP
EITSRNFNIRSFAERTAMNTPIQGSAADIIKKAMIDMYEKLEEEGLKTRLLLQVHDELIF
EAPKDEIEKLEEIVPNVMEHAMELSVPLKVDYSYGPTWYDAK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
ttgggaaaaagcactaaaaaattaatgctcatagacggaaacagtgttgcttaccgcgcg
tttttcgctttaccgctgttacataatgaaaaaggaatctacacgaatgcggtgtatggt
tttacaacgatgcttatgaaggtgctggaagaagagaagcctacacatatattggtcgcg
tttgatgcgggaaaaacgactttccgccataaaacgtacaaagaatataaaggagggcgc
caaaaaactccgccggaactctccgagcaatttccatacgtaagggagctgctggatgcc
tacggaattaagcgatacgaactggagaattacgaggcggacgatattatcggaactctt
gcagttgaggcggaaaaggacggatatgaagtaaaagtcatttccggcgacaaggacttg
acgcaattaagttccgaccatatcactgtggggattacaagaaaaggtatcacggatatt
gaaaactatacaccagaacatattatggaaaaatatggactgacaccagaacagatcatt
gatatgaaaggcttgatgggcgaccagtcagacaatattccgggagtgcctggcgtcgga
gaaaaaacagcgatcaagctgctgaaagaattcggtactcttgaaaaacttcttgagtcc
attgacaaggtcagcggtccaaaactgaaggaacgtttacaggaaaataaggaacaggca
gtgatgagtaaggaacttgcaaccatttctaaagaaactcctgttgaaatacctattgaa
gaattgctttatgagggctacaatccatcaaatctcagggttttatttcaagagcttgaa
tttaactcccttcttggaaaacttgaaggcggagaggaagaaagcgaagaagctgcagat
gaaaatgaagccattgagttccagacagtcgagtcaattgacgaggggatttttaccgaa
cagatggctctttacgtagaaatccttgaagataattatcatacagggacaattgccggc
tttggtctttccagcgaaaaagggaatgtattccttcccgcggaagccgcacttcaatct
gaagcctttaaaaactgggcggaagatgagacgaagaaaaagcatgtgtatgatggaaag
cggtcgattgtttctctaagaaagcacggggttgccttaaaaggaattgacttcgattta
cttcttgtttcctatctgcttaatccttccgaatctacgacagattttgcaggagtggcg
aaacgccatggatatacgaatgtccaaaccgatgaagcagtatacggaaaaggagccaag
aaaaaagtggctgaaggagatattctcgctgaacatctggccaagaaagcacttggcatc
gtctcattgtatcagccgctcctcgatgaattggaaaaaaatgaactcattgaccttttt
tatgacttagagctgcctttgtcgttcattttggccgacatggaatatacaggtatcaag
gtggatattgaccgcctcaaggaaatgaaagccgagatggctgagcgcctgaagcagata
gaagaaaaaatatatgggtttgcaggagaaaagttcaatataaattctccgaagcagctt
ggggtcattctttttgaaaagctgggtcttcctgtcattaaaaagactaaaaccggatat
tcaacagcggcagatgttcttgaaaagcttgctccttcccatgaaattatagaggaaatc
ctgaattaccgacagctcggaaaattacagtcgacctatatagaaggtctgcttaaagtg
gtgcataagggacctgataaagtccacacccgttttaaccaggcattgacgcagactgga
aggctgagttcaacggatcctaatctgcaaaacatccccatccgtttggaggaaggccgt
aaaatccgccaggcattcataccatctcacgaagactgggtaatttttgccgcggactat
tcacagattgaacttagggtccttgcccatattgcagaagatgataagctgatggacgct
ttcagaaatgacatggatatccatacaaaaacagctatggacgtttttcatgtaagcagg
gaagaagtcacatccaatatgcggagacaggctaaagcggtcaatttcggtatcatctat
ggaattagtgactatgggctatcccagaatcttggcatcactcggaaagaagccggcaca
ttcattgagcgctatctggaaagttttcctggtgtacgcaattacatgaaggatatagtc
atggaagccaaacagaatggctatgtttcaacccttctacacagaagaaggtatattcct
gaaatcaccagcagaaatttcaacatcagaagctttgcagaaaggacagcaatgaataca
ccgattcagggaagtgctgcggatatcataaaaaaagcgatgatcgatatgtatgaaaag
cttgaagaagaaggcctgaagactcgcctattgctgcaagttcatgacgaattgatcttt
gaagcaccaaaagatgaaattgagaagttggaagaaatcgttccaaatgtaatggagcac
gccatggaacttagcgttccgttgaaagtcgattattcatacggaccgacatggtatgat
gccaaatag
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