Bacillus freudenreichii: NCTC4823_01660
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Entry
NCTC4823_01660 CDS
T06767
Symbol
mutM_2
Name
(GenBank) Formamidopyrimidine-DNA glycosylase catalytic domain-containing protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC4823_01660 (mutM_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_01660 (mutM_2)
Enzymes [BR:
bfd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC4823_01660 (mutM_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC4823_01660 (mutM_2)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC4823_01660 (mutM_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Zn_ribbon_6
Zn_ribbon_IS1595
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
VEF47614
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All DBs
Position
1:1719198..1719998
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AA seq
266 aa
AA seq
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MPELPEMETYKKLLQQLIGGKPITGVVINRQKSINVPTDQFSRQIMNQKIDTIDRRAKHL
IFRLQNGSCLLLHLMLGGWMFYGKKEEQPDRTVQVQLSFGDRHLYFIGLRLGYLHLFSPE
MIQSELREIGPEPLDPNFSMNAFQDIVKNKKGSLKTTLMNQEAIAGIGNRYSDEILWHAQ
LLPKRKMNELGQEEVVRLYQSIRLILQKAIDQGGYMDPLFIGDNKTGGYEMDVHGHEGKA
CPRCTTPIAKIELSSRKTYFCKDCQH
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgagatggaaacatataaaaaattactgcagcaattgatcggaggc
aaaccgattacgggggttgtaatcaatagacaaaaatcgatcaatgtccccacggatcaa
ttttcccgtcaaataatgaatcaaaaaatcgatacgattgatagaagagcaaaacattta
atttttcgtctgcaaaatggctcgtgcttgttattgcatttgatgctaggtggatggatg
ttttatgggaaaaaagaagaacagccggatcgaaccgtgcaggtacaattgtcttttggg
gaccgtcacctttatttcataggactccgtttaggttatctgcatcttttttcacctgaa
atgattcagagtgagcttcgagaaatcggacctgagccgcttgatcccaatttttcgatg
aatgcatttcaggacattgttaaaaacaaaaaaggttcactaaaaactacactgatgaac
caagaagccattgccggaataggcaaccgctattcggatgaaatactttggcatgcacag
ctgctgccgaagagaaaaatgaatgaacttggccaagaagaagttgtgcgtttataccag
tcaatcagattgattttacaaaaggctattgatcaaggcggctatatggacccgcttttt
attggggacaataaaactggcggctatgagatggatgttcacggccatgaaggaaaggca
tgtccaagatgcactactcctattgcgaaaatagagctttcctcccgaaaaacatatttc
tgcaaagactgccagcactaa
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