Bacillus freudenreichii: NCTC4823_01718
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Entry
NCTC4823_01718 CDS
T06767
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03410
Base excision repair
bfd03430
Mismatch repair
bfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC4823_01718 (recJ)
03430 Mismatch repair
NCTC4823_01718 (recJ)
03440 Homologous recombination
NCTC4823_01718 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_01718 (recJ)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NCTC4823_01718 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NCTC4823_01718 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC4823_01718 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
VEF47672
LinkDB
All DBs
Position
1:1774351..1776720
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AA seq
789 aa
AA seq
DB search
MLQSKTRWIVREADKKIVQMLSDELNLSQLTATLLVNRGITDPEEAHRFLYIEKEEFHDP
FLMQDMRKAVDRIRKAIEMQEKILVFGDYDADGVTSTAVLMTVLKDLGAIVEYYIPNRFT
EGYGPNEGAFRRAAADGIGLIITVDTGISSVHEAEVAKELGMDLIITDHHEIRPEIPSAY
AIIHPRYNDSPYPFPDLAGVGVTFKLAHALCGAAPEKLLDLVAVGTIADLVPLHGENRLI
VKKGLRVLARSARPGLVALSRLAGANLAEANEETVGFTIGPRLNAAGRLYSADPAADLLM
SKDEQTAEQLAEDIEQFNIERKEIVSEITKEAINMVDTLYPPSENHVLVIGKEGWNPGVI
GIVASRLTEKYYRPVIILGYDQETGKAKGSGRSIKGFDLFANLLSCSDLLEHFGGHPMAA
GMTLSISGVEDLRTRLNSAAKEQLSEEDLVPYTDLDAEATLVNVDIDLIKELDLLAPYGV
MNPKPKFMVNEAGVQDKRKIGAAQNHLKLTLKQGGGMLDGIGFNLGEIADSISPDAKMSV
VGELAINEWNNIRKPQIFIRDAAINNWQLFDLRGNKRPESWLPLLPDKNITFIVFNQNSL
SEFPLDSGETDIKIIADAEEARRLTLDGKSIVLLDLPPSIDLLEEMLTGKSPDRIYAHFY
HGRGEYFKTIPTRDHFKWFYAFLAKRRTFDVKKYGKELEAYRGWSNETVEFMTQVFFELE
FVTIKDGVIVLNQVKMKKDLTESPAYQEKQAVIELENELIYSSYQELKQWFEKRVSHPVY
YEEEVDAWT
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgttacagtcaaaaactcgatggatcgtccgggaagcggataagaaaatagtccagatg
ctatccgatgaacttaatttatcgcagctcactgccacgttattagtaaatagaggcata
acagatcctgaggaagctcatagatttttatatatagaaaaagaagagttccatgatcca
tttttgatgcaggatatgcgaaaagcggttgaccggatacgtaaggccatcgaaatgcag
gagaaaatccttgtgtttggcgattatgacgccgatggtgtaacaagtactgctgtatta
atgacggtattaaaggacttaggggctatcgtcgagtattacatacccaaccgattcacc
gagggatacggtccaaatgaaggggcgtttcgccgtgcagctgccgacggaatcgggctt
atcatcactgttgatacagggatttcttctgtccatgaagcagaagtagcaaaagagctt
ggcatggatttgatcattacagaccatcacgaaataaggccggaaataccttctgcctat
gctatcatccatccaaggtacaatgactccccttatccatttccggatcttgccggggta
ggtgtcacgtttaagcttgcccatgcgttatgcggtgctgcaccggaaaaattacttgac
ctggtagctgtcggaacaattgccgacctcgttccgctgcatggggaaaaccgtctcatt
gtcaaaaaaggccttagggtccttgccagatctgcgaggccgggacttgttgcattaagc
aggctggcaggcgcgaacctggccgaagcgaatgaggaaaccgttggtttcacaattgga
ccgcgtttgaatgcggctggcagactttattcagccgaccctgccgctgatcttttaatg
tcaaaagatgaacaaacagcagaacagttggcagaggatatcgagcaatttaatatcgaa
agaaaagagattgtgtcagaaataactaaagaagcgataaatatggtggatactttatat
cctccgtccgaaaatcatgtgcttgtgattggaaaagaaggttggaatcccggggtcatc
ggtattgtcgcatcaaggctgactgagaaatactacaggccggtaattattcttggttac
gaccaagagaccggcaaggcgaagggatctggcagaagcatcaaaggctttgatttattt
gcaaacctgctttcctgctctgatctgcttgaacactttggcgggcatcccatggctgcc
ggaatgactctttcaatttccggtgtagaagacttgcgaaccagattgaatagcgcagca
aaagaacagttgagtgaagaggatctagttccatacacagatttggatgctgaggctaca
ttggtcaatgtggatattgatttgatcaaagagctggatttgcttgcgccgtacggcgtg
atgaacccaaaaccaaagtttatggtcaacgaagctggtgtgcaggataaaaggaaaatt
ggtgccgcacagaaccatttgaagctgacattaaagcagggtggcggaatgctggacggt
atcggctttaatctcggggaaatagctgacagcatttcaccggatgccaaaatgtcggtc
gtcggcgagcttgctattaacgaatggaataatataagaaaaccgcaaatatttattaga
gacgcagctattaataattggcagctgtttgatttgagaggaaataagcggcctgaaagc
tggctgcccctattaccggataagaatataactttcatagtttttaatcaaaacagcctg
agtgagtttcccttggattccggtgagaccgatattaaaattattgctgatgccgaagag
gcgagacgtctgacgcttgatgggaaaagcatagtccttcttgatctccctccgagcatc
gatcttctcgaggaaatgctaacaggaaagtcaccggatcggatttatgcacatttctat
catgggcgcggggaatattttaaaacaattccaacacgggaccattttaaatggttttac
gcttttcttgctaaaaggcgcacttttgacgtcaaaaaatatggcaaagagcttgaagct
taccgaggatggtcaaacgaaacagtggagttcatgactcaagtgttttttgaattggaa
tttgttacaataaaagatggagtcattgtgttaaatcaggtaaaaatgaaaaaggattta
acggagtcgcctgcctatcaagaaaaacaggcagttattgaactggaaaatgaactgatc
tattcatcataccaggaattgaagcaatggtttgagaagagagtctcacaccctgtttac
tatgaggaggaagtggatgcatggacttaa
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