Bacillus freudenreichii: NCTC4823_01775
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Entry
NCTC4823_01775 CDS
T06767
Symbol
holA
Name
(GenBank) holA: DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03030
DNA replication
bfd03430
Mismatch repair
bfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC4823_01775 (holA)
03430 Mismatch repair
NCTC4823_01775 (holA)
03440 Homologous recombination
NCTC4823_01775 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfd03032
]
NCTC4823_01775 (holA)
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_01775 (holA)
Enzymes [BR:
bfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC4823_01775 (holA)
DNA replication proteins [BR:
bfd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC4823_01775 (holA)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC4823_01775 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HGD-D
ComA
DUF1848
Motif
Other DBs
NCBI-ProteinID:
VEF47726
LinkDB
All DBs
Position
1:1828127..1829140
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AA seq
337 aa
AA seq
DB search
MSIIKKIKSKKFSPLYLLYGTESFLINEVKQKLMSNVLTNDESEFNYSAYDLEETPVELV
IEDAETYPFMGEKKLIIVHNPVFLTAVKPKEKVEHNLKKLEEYLANPAPYTVLAFTANYE
KLDERKKITKLIKKHAEVLEAKPLNEVQLKNWIKDRAVLYNVKAEDPAIDTLLFMAGGDL
MVLNEELIKLSLYVGEGGSITEDTVKSLISRSLEQNVFSLTENVVKRKSDEVLRIYYDLM
KQNEEPIKILSLIAGQFRLIYQVKELTGRGYSQKHVASMLKVHPYRVKLAAGQGSSFSNE
ELKAIIHLIAECDITLKTGGLDRSVAVELLLMKILKK
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgagcataataaaaaaaattaaaagcaagaaattttcgccattgtatttattatacgga
acggaaagctttttaatcaatgaggttaagcaaaaactaatgtcgaacgtgttaacgaat
gatgaatccgagtttaattactcagcctatgatcttgaagaaacccctgtggagcttgtg
atcgaggatgccgagacatatcctttcatgggagaaaagaaactgattattgtacataat
cctgtttttttgacggctgtgaagccaaaggaaaaggtggagcataatttaaaaaaactc
gaggaatatttagccaatcccgcaccgtatacagtcctggcatttactgctaattacgaa
aagcttgatgaaagaaaaaaaatcactaaactaatcaaaaagcacgctgaggttttggag
gcgaagccactgaatgaggtccagttgaaaaattggatcaaagaccgtgctgttttgtac
aatgtcaaagcagaagatcccgcaattgacactttgctatttatggcaggcggcgatttg
atggtgctgaacgaagagcttataaagctatctctttatgttggcgaaggaggttcaatt
acagaggacacagtcaaaagcctcatatcaagatcccttgagcagaatgtattttcattg
acagaaaatgtagttaagcggaaaagcgatgaagtcctccgtatctattatgatctgatg
aaacagaatgaggagccaatcaaaatactgtcgctcatcgctggacaattcaggctcatt
tatcaagtaaaggaattgactggacgaggttatagccaaaagcatgtggcaagcatgctg
aaagtgcatccttaccgtgtaaaattggcagccggacaagggagttctttttcaaatgaa
gaattgaaggcaatcattcatctgattgcggaatgcgacataacattaaaaaccggagga
ctcgatcgatctgtcgccgtggaattgctcctgatgaaaatcctgaaaaaataa
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