Bacillus freudenreichii: NCTC4823_01787
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Entry
NCTC4823_01787 CDS
T06767
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfd03016
]
NCTC4823_01787 (rimO)
Enzymes [BR:
bfd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
NCTC4823_01787 (rimO)
Transfer RNA biogenesis [BR:
bfd03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
NCTC4823_01787 (rimO)
Prokaryotic type
Methylthiotransferases
NCTC4823_01787 (rimO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
eRF1_2
DUF229
Motif
Other DBs
NCBI-ProteinID:
VEF47738
LinkDB
All DBs
Position
1:1841897..1843246
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AA seq
449 aa
AA seq
DB search
MSLVAFHTLGCKVNHYETEAIWQLFKNNGYERVEFEDTADVYVINTCTVTNTGDKKSRQV
IRRAIRKNPDAVICVTGCYAQTSPAEIMAIPGVDVVVGTQDRVKMLDYIEQYKNERQPIN
GVGNIMKNRVYEELDVPAFTDRTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEEVIRQ
AQQLVDAGYKEIVLTGIHTGGYGEDMKDYNLAALLRDLEAKVKGLKRLRISSIEASQLTD
EVIDVIDKSKLVVRHLHIPLQSGSNTVLKRMRRKYTMEFFAERLELLKKALPDLAITSDI
IVGFPGETEDEFMETYNFVKEHKFSELHVFPYSMRTGTPAARMKDQIDESVKNERVHRLI
TLSDQLAKEYASKFEDEVLEVIPEEPFKDNPDNGLYVGYTDNYLKVVFPATEEMVGKLVR
VKITKAGYPYSEGQFVRVMDEDAPASMVV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgtggcatttcatacattaggctgcaaagtcaaccactatgaaacggaagcc
atttggcagctgtttaaaaataacggctatgaacgggttgagtttgaagatactgctgac
gtttatgtcatcaatacttgtacggttactaatactggcgacaagaaaagccggcaggtc
attcgcagggcgattcggaaaaatccagatgcggtgatttgtgtaaccggctgttatgca
caaacttcaccggcagaaatcatggctattccgggtgtagacgttgttgtgggaacccag
gaccgggtgaagatgctcgattatatcgagcaatataaaaatgagcgccagccgattaat
ggtgtaggcaatatcatgaaaaaccgtgtttatgaggaactggatgttcctgcatttacc
gatagaacacgtgcttctcttaaaattcaggaaggctgcaacaacttctgtacgttttgc
atcattccttgggcacgtggattaatgcgttctcgggatcctgaagaagttatccgccag
gcacagcagcttgtagatgccggatataaagaaattgtattaaccgggattcatacaggt
ggttacggtgaggacatgaaagactacaatctggcagctttgcttcgtgatcttgaagcg
aaagtgaaaggattgaaaagacttcggatttcctccatagaagcgagccagcttacggat
gaggtcattgatgtcatcgataagtccaagcttgtcgtaagacacttgcacatacctctt
caatcaggctcaaacacagtgttaaaaagaatgcgccgtaaatatacgatggagtttttt
gcagaacgtcttgaactattgaaaaaagcattgcctgatctggcgatcacttcggatatc
atcgttggttttccgggtgaaaccgaagatgaattcatggaaacatataattttgtaaaa
gagcataaattctctgagcttcatgtattcccatactccatgagaaccgggacgcctgca
gccaggatgaaagatcagattgatgagagtgtcaaaaacgagcgcgttcaccgcttaatt
acactttcggaccaattggcaaaagaatatgcctccaaatttgaggacgaggttcttgaa
gtcattccagaggagccgttcaaagataaccctgacaacggcttatatgtaggctatact
gacaattatcttaaagttgtttttccggccacagaggaaatggtcggcaagcttgtaagg
gtaaaaataacaaaagctggatatccatacagcgaagggcagtttgtccgtgtaatggat
gaagatgccccggcctctatggtggtataa
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