Bacillus freudenreichii: NCTC4823_01827
Help
Entry
NCTC4823_01827 CDS
T06767
Symbol
yqfR
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfd03019
]
NCTC4823_01827 (yqfR)
03009 Ribosome biogenesis [BR:
bfd03009
]
NCTC4823_01827 (yqfR)
Enzymes [BR:
bfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NCTC4823_01827 (yqfR)
Messenger RNA biogenesis [BR:
bfd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC4823_01827 (yqfR)
Ribosome biogenesis [BR:
bfd03009
]
Prokaryotic type
rRNA helicases
NCTC4823_01827 (yqfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
VEF47777
LinkDB
All DBs
Position
1:1882961..1884274
Genome browser
AA seq
437 aa
AA seq
DB search
MADYSFEDYRLKPFINKAISRLGFRQPTLIQRKMIPLILKGQSAIGQSQTGSGKTHAYLL
PIIQKIDPARRHVQAVIFAPTRELASQIYQEALKITESNEGEEILVRNYTGGTDKQRTIE
KLKQQPHLVIGTPGRIHDLVREQALFVHNTEALVIDEADLMFDMGFIQDVDQIAGRMPEN
LEMFVFSATIPEKLKPFLKKYMENPVFEHATPSQLAAELIEHVLVPIGSRKKTDLLSQML
QSINPYLAIVFTNTKQMADQVADQLIGHGLKIGRIHGGLTPRERKRMMKQVRDLEFQYII
ATDLAARGIDIPGVSHIINYELPKDLDFYIHRSGRTARAGNQGVSYTIYEPSDEDAIVRL
EKMGIQFAHQDLRGEEWVELPDRNRRKNRMQLKEKEDSSKIYVRKPKKVKPGYKKKMAAE
FERLKRRERRLQRNKKK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggctgattacagttttgaagattaccgattgaaaccattcattaataaagcaataagc
aggcttggatttcgacagcctacactgatccagcgcaaaatgattccgctgattttaaaa
ggacagagtgctattggccagtcacaaacggggtcaggcaagacacatgcgtatttgctg
cctatcattcaaaaaattgatcccgcgcgccgtcatgtccaagcagtgatttttgcgcct
acaagggaactggcaagtcaaatttaccaggaggccctaaaaattacggaatccaatgaa
ggtgaagagattctggtccgtaattataccggaggcactgacaagcaacgaacgatagaa
aagctgaagcagcagccgcaccttgtgattgggacaccaggcaggattcacgaccttgtc
agagagcaggcattattcgtccataacactgaagctctggttattgatgaggctgatctg
atgtttgacatgggcttcattcaagatgtggaccaaattgcaggacggatgccggaaaat
cttgaaatgtttgtcttttctgcaacaattccggagaagctgaagcctttcttaaaaaag
tatatggaaaaccctgtttttgagcacgcaacaccgagccaactggctgctgaactgatt
gagcatgtgctagttcctatcggcagcagaaaaaaaacggatctattaagccaaatgctt
cagtccatcaatccctatttggcaattgtattcactaatacgaagcaaatggcagatcag
gtggccgaccaattgatcgggcacggtttaaagattggcagaatccacggaggactgact
ccgcgagaaaggaagcggatgatgaagcaggtccgtgacttggagtttcaatacatcatt
gcgaccgatctggccgcaagaggaattgatattcctggagtgagccacatcatcaattac
gagcttcctaaggacttggacttttatattcaccgttcgggcaggactgcgcgagcgggt
aaccaaggtgtttcatatacaatatatgagccgtctgatgaagatgcgattgttcggctg
gaaaaaatggggattcaatttgcccatcaggatttgcgtggagaggaatgggttgaactc
ccggatcgaaaccgcagaaagaacaggatgcaattaaaagaaaaagaagacagcagcaaa
atatatgtaagaaaacccaaaaaagtcaaaccgggatataaaaagaaaatggcggcggaa
ttcgaaagattaaagagacgggaacgccggcttcaaagaaataaaaagaagtaa
DBGET
integrated database retrieval system
