Bacillus freudenreichii: NCTC4823_01828
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Entry
NCTC4823_01828 CDS
T06767
Symbol
nfo_2
Name
(GenBank) endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC4823_01828 (nfo_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_01828 (nfo_2)
Enzymes [BR:
bfd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
NCTC4823_01828 (nfo_2)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NCTC4823_01828 (nfo_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
VEF47778
LinkDB
All DBs
Position
1:1884307..1885209
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AA seq
300 aa
AA seq
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MLKIGSHVSMSGKKMLLGSSEEAISYGANAMMIYTGAPQNTRRKKIEELNIDAGTLHMKE
NGIIDLIVHAPYIINIGNTVNPATFELGVNFLQSEIDRTNAIGAKQIVLHPGAHVGEGAD
KGIEKIIEGLNEVLTADQEVQIALETMAGKGSECGRSFEELAKIIEGVTHNEKLTVCFDT
CHTHDAGYDIVNDFDGVLDEFDRLIGIDRIKVVHVNDSKNERGARKDRHENIGFGHIGFD
ALDYIIHHPQLSEAPKILETPYVGADKKNKKAPYKHEIDMIKSRKFDEGLLEKITGEVTV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaaaataggttctcatgtatcaatgagcggaaagaaaatgcttcttggatccagt
gaggaagcaatttcctacggtgcaaacgccatgatgatatatacaggtgcaccgcaaaac
acgagaagaaagaaaatcgaggagttaaacattgatgccggaacacttcacatgaaggaa
aacggcatcattgatttgattgtacatgccccttacatcataaatataggtaacactgta
aatccggctacatttgaacttggcgtaaatttccttcaatcggaaatagacaggaccaat
gcaataggggccaagcaaattgttcttcacccaggtgcacacgtgggtgagggtgccgat
aaaggcattgaaaaaatcattgaggggcttaatgaagtattgacagcagaccaggaagtg
caaatagcccttgaaacaatggccggaaaaggttcggaatgcggtcgttcgtttgaagag
ctggccaaaatcattgagggcgtgacacataacgagaagcttacggtttgcttcgataca
tgccacacccatgatgcaggctatgatattgtgaatgactttgatggagtattagatgaa
tttgaccggcttataggaattgacaggatcaaggtcgttcatgtgaatgacagcaaaaat
gagcgcggagcgaggaaagaccgtcatgaaaatattgggttcggccatataggtttcgat
gctctagattacatcatccatcatccgcagctttcagaagcaccaaaaatattggaaact
ccttatgtaggagccgataagaaaaataaaaaagcaccgtataaacatgaaatcgatatg
atcaaaagccgcaagtttgatgaaggacttttggaaaaaattacgggagaagtgactgtg
taa
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