Bacillus freudenreichii: NCTC4823_02028
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Entry
NCTC4823_02028 CDS
T06767
Symbol
hupA
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfd03032
]
NCTC4823_02028 (hupA)
03036 Chromosome and associated proteins [BR:
bfd03036
]
NCTC4823_02028 (hupA)
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_02028 (hupA)
DNA replication proteins [BR:
bfd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC4823_02028 (hupA)
Chromosome and associated proteins [BR:
bfd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
NCTC4823_02028 (hupA)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
NCTC4823_02028 (hupA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
DUF2267
Rpf1_C
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
VEF47968
LinkDB
All DBs
Position
1:2070550..2070822
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AA seq
90 aa
AA seq
DB search
MNKTDLINSVAEAAELSKKDATKAVEAVFQSIQDTLSNGDKVSLIGFGNFEVRERAARKG
RNPQTGEEIDIAASKVPAFKPGKALKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgatttgatcaattctgtagctgaagcggcagagctatctaaaaaagat
gcaacaaaagctgtagaagctgtattccaatccattcaggacacattgtcaaatggcgat
aaagtttccttgatcggttttggtaactttgaagttcgtgagcgtgctgcccgtaaaggc
cgtaaccctcaaacaggtgaagagattgatatcgcagcaagcaaagtgcctgcattcaaa
ccaggtaaagctcttaaagatgctgtgaaataa
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