Bacillus freudenreichii: NCTC4823_02494
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Entry
NCTC4823_02494 CDS
T06767
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfd03032
]
NCTC4823_02494 (topA)
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_02494 (topA)
Enzymes [BR:
bfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC4823_02494 (topA)
DNA replication proteins [BR:
bfd03032
]
Prokaryotic type
DNA Topoisomerases
NCTC4823_02494 (topA)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC4823_02494 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
ANAPC15
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
VEF48416
LinkDB
All DBs
Position
1:complement(2538105..2540180)
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AA seq
691 aa
AA seq
DB search
MSDYLVIVESPAKAKTIERYLGKKYKVKASMGHVRDLPKSQTGVDVENNYEPKYITIRGK
GPVLKELRTAAKKAKKVYLAADPDREGEAIAWHLAHSLDVDIKSDCRVIFNEITKDAIKE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPLLWKKVKRGLSAGRVQSVAVRLIIDREN
EIKKFVPEEYWSIEGLFKKGKDQFQANFYGVNGKRHKLQSESDVKEVLGKIDGSSFLVKS
VTKKERRRNPARPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKEGTVGLITYMR
TDSTRVSDIAVKEAAEYITKQYGKEYLATGTRKEKKQANTQDAHEAIRPTSTMRGPNDVK
AYLSRDQLRLYRLIWERFVASQMAPAVMDTMTVDLTNGDVIFRANGSQIKFPGFMKVYVE
GTDDQSEEKENVLPSFVEGEKVASEKLTPKQHFTQPPPRYTEARLVKTLEELGIGRPSTF
APTLDTIQRRGYVALDNKRFVPTELGEIVTELMMEFFPEVLDVEFTANMESNLDEIEEGH
VAWVNIIDEFYKKFEVNLKKAEIEMKEVEIKDEYAGEDCEQCGNPMVIKMGRFGKFMACS
NFPDCRNTKPIVKEIGVKCPKCKEGNVIERKSKKKRIFYGCDRYPECDFLSWDKPINRPC
PKCDELLVEKKLKKGKQVQCVKCDYKEEPQQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattacttggtaatagtggaatcgccggctaaggcgaagaccattgaaagatat
ttagggaaaaaatataaagtgaaagcatccatgggacatgttagggatttgccgaaaagt
caaacgggtgtagatgttgaaaataattatgaaccaaaatatataactatcaggggaaag
ggccctgttttaaaagaattaaggactgcagccaaaaaagctaaaaaagtatatctggca
gctgaccccgatagagaaggagaagctattgcctggcatttggcgcacagtcttgatgtt
gacattaagtcagactgccgtgtcattttcaatgaaattacaaaagatgcaatcaaagaa
tcttttaaacaccctcgtccaattaatatggatcttgttgatgcacagcaggcaagaagg
atattggacagacttgtagggtataatatcagcccgctgctctggaaaaaagtgaaaaga
gggttgagtgccggcagggtgcagtcagtggcagtccggcttatcatagatagggaaaat
gagattaagaaatttgtccctgaagaatactggtcaattgaagggttgtttaaaaaagga
aaagatcaattccaagccaacttttatggcgttaatggaaaaaggcacaagctgcaatct
gaaagtgatgtaaaagaagtccttggaaaaatagacggaagcagtttcctagtcaagtcc
gtgacaaagaaagaaagaagaagaaaccctgcccgtccgtttacaacgtcttcacttcaa
caggaagctgcgagaaagttgaactttagagccaaaaaaacgatgatgctcgcgcaacaa
ttatatgaagggatcgacttgggaaaagaaggtacggtaggtctcatcacatatatgcgt
acggattccacaagggtttccgatatcgctgtaaaggaagcagccgaatatattacaaag
cagtatgggaaggaatatttagcaaccggaacccgtaaggaaaaaaaacaggcaaatacc
caagatgcgcatgaagccatccgtcctacgagcaccatgagagggccaaatgatgtcaaa
gcctatcttagccgtgatcagttgagactttacaggttaatatgggaacgtttcgttgca
agtcaaatggcgcctgcagttatggatacgatgactgtcgacctgacaaacggcgatgtc
atattccgtgcaaatggatctcaaataaagtttcccggtttcatgaaggtttatgtagaa
ggcaccgatgatcagtcggaggaaaaagaaaatgtgctgccttcttttgtcgaaggtgaa
aaagttgcatctgaaaaactgactccaaaacaacactttacccagccacctccaagatat
acagaagcgaggctggtcaaaactttagaggaacttggtataggaagaccttcgacattc
gcccctacgcttgatacgattcaaagacggggatatgtcgcattggataacaaacgtttt
gtaccaacggaactcggtgagattgttactgaactaatgatggagtttttcccggaagta
cttgatgtagagtttacagctaatatggaaagcaatctggacgaaattgaagaaggccat
gtcgcttgggtcaatattatagatgaattttataaaaaatttgaagtgaatttaaaaaaa
gcggaaattgaaatgaaagaagttgaaatcaaggatgaatatgccggggaagactgcgag
caatgcggtaacccaatggtcatcaaaatgggccgtttcggcaagttcatggcatgcagc
aatttccctgattgcagaaatacaaaaccgattgtaaaagaaatcggtgtaaagtgccca
aaatgtaaagaaggcaatgtcatcgagcgaaaaagcaagaaaaagcggatattttatggt
tgcgaccgataccctgaatgtgacttcctatcctgggataagccgatcaatcgcccttgt
cctaagtgtgatgagcttctggttgagaaaaagctcaaaaaaggaaagcaggtccaatgc
gtcaaatgtgactacaaagaggaaccacagcaataa
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