Bacillus freudenreichii: NCTC4823_02531
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Entry
NCTC4823_02531 CDS
T06767
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NCTC4823_02531 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_02531 (priA)
Enzymes [BR:
bfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC4823_02531 (priA)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NCTC4823_02531 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PIF1
ATPase_2
SLFN-g3_helicase
AAA_30
ADDB_N
AAA_19
AAA_16
TrwB_AAD_bind
Zn_ribbon_6
T2SSE
Kinesin
RecA
UvrD-helicase
SWI2_SNF2
HypA
Motif
Other DBs
NCBI-ProteinID:
VEF48453
LinkDB
All DBs
Position
1:complement(2576350..2578752)
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AA seq
800 aa
AA seq
DB search
MTIAQVIVDVPALGTDRVFDYAVPEKWEGIIRPGMRVAVPFGPRSIQGFVVDLKEDTDVE
KLKDIKQPLDLAPVLNEELLNLGHWMAYETLSFKISVFHAMLPVAMKAKYEKIIRRTDNS
AILLDDLFEGKQEISWKEAEKRNLLPALHKQIENGNAEVIYFVKDRARKKLKKAVRVNAG
KEELEELLQTLPANAVNQIKLMQFLLNFSPDTIETSILAKEAEVPTAAINALIKKGVFSE
LLMEEYRDPYKHRDFERTEPLELTNDQREAMNPILQSINDDRHETFLLYGVTGSGKTEVY
LQAIQEVIEQGKEAIVLVPEIALTPQMVERFKGRFGSDVAVLHSRLSIGEQYDEWRKVQR
KEVKVVVGARSAVFAPFENLGIIIIDEEHESSYKQEETPRYHARDVAIKRGENHHCPVIL
GSATPSLESFARAQKGVYHLLCLSKRMNDRELPPVSVVDMREEMRTGNRSMFSTELFEKI
KDRLYKGEQTVLFLNRRGHSTFIMCRDCGYVMQCPHCDISMTYHRSTNEMKCHYCGFQTT
VPVECPECSSSHIRYFGMGTQKVEEELVKLLPEARVIRMDVDTTTRKGAHERILDHFQSG
KADILLGTQMIAKGLDFPNITLVGVLSADTMLHLPDFRAAEKTFQLLTQVSGRAGRHELS
GEVVVQTYTPEHYSIQLAALQDYQRFYNQEMTMRKIGSYPPYYYLALVTVTHDDLLQAVT
VTEKISAYLQQNISKEAILLGPVASPIPKINDRYRYQCLIKYKREPNLLSSLRKVLEHYN
KQTARDGFSVTIDINPYNMM
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcacaagtcattgttgatgttccggccctgggaacagacagagtatttgat
tacgctgttccggaaaaatgggagggtattatccgaccggggatgcgtgttgccgtcccg
ttcggtcccaggtccatacagggctttgttgtggatttgaaagaagatacagatgtagaa
aagttgaaagacatcaaacagccgcttgaccttgcgcctgtgctgaatgaagagcttctg
aatcttgggcactggatggcatatgagactttatcatttaaaatatctgtatttcatgca
atgctgcctgttgctatgaaagcgaagtatgagaagattatccgcaggacagataactca
gccatactactagatgacttgtttgagggaaaacaggagatttcatggaaggaagctgaa
aaacggaacctacttcccgcacttcataagcagattgaaaacggaaatgctgaagttatt
tactttgtaaaagacagggccaggaaaaaattaaaaaaagctgtcagagtaaacgcagga
aaagaggagttggaggagcttcttcaaactctgcctgccaatgccgtcaatcaaataaaa
cttatgcaatttctcttgaatttcagtcccgatactattgaaacgtccattttggcaaaa
gaggccgaagttccgacagccgccataaatgcattgataaaaaagggagtcttttcggaa
ctcttgatggaggaatatcgcgatccgtataaacatagggattttgaaagaacagagccg
cttgaactaacgaatgaccaaagagaagcgatgaatccgattttacaatcaatcaatgac
gaccggcatgaaacatttctcttgtatggtgtcacaggcagcggaaaaacagaagtttat
ttgcaggcgattcaggaggtaatagaacaggggaaagaagcgatagttcttgtccctgaa
atcgccttgacgccgcagatggttgagcgttttaaaggaagatttggaagtgatgtcgcc
gttttgcacagcaggctttccatcggggaacagtatgatgaatggagaaaggtccaaagg
aaggaagttaaagtggtagtaggggcacgttcagccgtctttgccccctttgagaatctt
ggaattataattattgatgaagaacatgagtctagttacaagcaggaagagactccgcgc
taccatgctcgggatgtagcaatcaaaagaggagagaatcaccattgtcccgtgattctc
ggcagtgccaccccttcgcttgagtcttttgccagagcacaaaaaggcgtatatcactta
ctttgcttgtcaaaaagaatgaatgacagggaacttcctcctgtttcagttgttgatatg
cgggaggaaatgagaactggaaaccggtcgatgttttcaactgaactttttgaaaaaatc
aaagaccgtctttataaaggagagcagaccgtcctgttcttgaaccgccgcggacattcc
acttttatcatgtgcagagattgtggttatgtcatgcaatgtcctcactgtgatatctca
atgacttaccatcgatcaacaaatgaaatgaaatgccactactgcggctttcaaaccact
gttccagttgaatgtcctgagtgcagcagcagccatatcagatactttggaatggggacc
caaaaagttgaggaagaattggtgaagcttcttccggaggcaagagtcattaggatggat
gttgatacaacaacgagaaaaggggcccatgaacggattcttgatcattttcaatcaggg
aaagcggacattctgctggggacacaaatgattgccaaaggattggactttccaaatatc
actctagtaggagtgcttagtgcagatacgatgcttcatttaccggatttccgggccgcc
gagaaaacatttcagcttctaacacaggtcagcggcagggctggaaggcatgagttgtcc
ggggaagtggtcgttcaaacatatacccctgaacattacagcatccaattggcagcgttg
caggattaccaacgcttttacaatcaagagatgacaatgagaaaaattggctcttatccg
ccatattattatttggcccttgtaactgtcacacatgatgatttgctgcaagcagtcacc
gttaccgaaaagatctccgcctatttgcaacagaacatctctaaggaagcgatattattg
gggcctgttgcatctccgataccaaaaatcaatgatagatatcgctatcaatgtctgata
aaatacaagcgtgaaccaaaccttctttcatctttaagaaaggtgttggagcactataac
aaacaaactgcccgtgatgggttttccgtcactattgatattaacccttataacatgatg
tag
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