Bacillus freudenreichii: NCTC4823_02813
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Entry
NCTC4823_02813 CDS
T06767
Symbol
addA
Name
(GenBank) recombination helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_02813 (addA)
Enzymes [BR:
bfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC4823_02813 (addA)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC4823_02813 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
AAA_12
Dna2
CARD
ResIII
Motif
Other DBs
NCBI-ProteinID:
VEF48727
LinkDB
All DBs
Position
1:complement(2866690..2870475)
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AA seq
1261 aa
AA seq
DB search
MSSHVYGKKVKNLKTDIPVKPENAQWTDDQWKAIFAKDQDVLVAAAAGSGKTAVLVERII
QKVIAETDPLDVDQLLVVTFTNAAAAEMRARIGAALTQAINERPESNHLRKQLGLLNRAS
ISTLHSFCLEAVRKHYYMVDIDPNFRVADDNEMALLRDEVLDDLFEEEYGKENNEPFFKL
VDTFTGDRSDGELQELVLKLYDFSRSHPYPDLWLDALVDMYNIPQGARIEELPFAQMLIA
DIELQLTGARQMLEQAYEMTKIPGGPAPRAVNYLDDLEIVARMQKAAQVSWASLHETMNS
WKFTRAKSCRGDEYDEDLVKDADALRKKAKGILEKLADDIFSREAEGFLRDMREMHPIYQ
ALVSLVKAFAIQFAMEKKERGIVDFADLEHLALHILVDHENQKSDIRPSDIAVGYRNQFK
EVLVDEYQDVNMVQETILQLISAEGEYDGNLFMVGDVKQSIYRFRLAEPNLFLAKYKRFS
PDGLNNGLRIDLSRNFRSRSEVLDGTNFLFKQIMGVSVGEIDYNRDAELVLGASYPSDET
YPIEVALIDQSEEKSDSGNKPEDGGFDEEEIEQSRLEARYLAKKIREIIDSERPIYDSKA
GRHRPAQYKDIVILLRSLTWAQDIMDEFKHEGIPVYANLTSGYFEATEVAVMMSLLKVVD
NPDQDIPMAAVLRSPIVGLDEEALAQIRAQFRKGSFYNAVKSFIKTSGDSSHEMIREKLA
SFFENLNGWRSMARTGALSSLIWQLYRDTGFYEFAGGLPGGKQRQANLRALYDRASQYEE
TSFRGLFRFLRFIERMQDRGKDLGAARALGEQEDVVRLMTIHSSKGLEFPIVFASGLGRK
FNMQDINSAFLFDKDYGFASKYIDSDKRISYPSLPQLALKRKKRMELAAEEMRVLYVALT
RAKEKLFLVGIVKNLDKEIKKWAKGSIGGNWLLKEYDRASAATYMDWLGPAIIRHRDCSI
DGIPESSTGEINEHPSRWKVEVLSSSDLSLTEEESEVESDGWLEMVKEGRLSSIRSPLKE
KVFSRLSWRYPHLIAAKRMSKQTVSELKRMAELQDDASAASILGGSRTTAPIFNKPKFLQ
KQSISPAERGTVMHTVMQNVTLDEEPSLISIERLLDELIHKEILTLEQADAVSAEQIVQF
FQTDLGKRVLHSPKTEREVPFTMGIPAEEIYEDWDGEDESVIVQGIIDCIIVEENGVVLL
DYKTDAITGRFPGGFDQAKTVLEKRYKTQIHLYEQAIEKIWRKQVKEKYLYFFDGGHLLT
M
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgcacgtatacgggaagaaggtgaagaacttgaaaactgatattccagtaaaa
cctgaaaatgcgcaatggacggatgaccaatggaaggccatttttgcaaaagaccaggat
gtattggtggcagcggctgcaggttccgggaaaaccgcggtccttgtagagcggattata
caaaaagtgatagcggaaacggatcccctggatgttgatcagctgctggtcgtcactttt
accaatgccgcagctgcagagatgagagctagaatcggggcagcattgactcaggcaatt
aacgaacgacccgaatccaaccacttaaggaagcaacttggactgttgaacagggcgtcc
atttcaacacttcactctttttgccttgaagcagtgagaaaacattattatatggttgat
attgatcctaacttcagagtagctgatgataacgaaatggctcttttgcgtgatgaagta
ctggatgacttattcgaagaggagtacggaaaggaaaataatgagccatttttcaagctg
gtggatacttttaccggcgaccgaagcgatggcgagcttcaggagcttgttcttaaatta
tatgatttttcccgctcgcacccatatccggacctttggcttgacgctcttgtcgatatg
tacaatattccgcaaggggcccgcatcgaagaacttccgtttgcgcagatgctgattgcg
gatattgagctgcaacttaccggagcaaggcaaatgctggaacaggcttatgaaatgacg
aaaattcctggcggtcctgctccgagggcggtcaactatttagatgacttggaaatagtg
gccagaatgcagaaagcagctcaagtaagctgggctagccttcatgaaacgatgaacagc
tggaagtttacccgtgcaaaaagctgccgtggcgatgagtatgatgaggatcttgttaaa
gatgccgatgcgttgaggaagaaagcgaagggaatattggaaaagttggctgatgatata
ttttccagggaggcggaaggatttttacgggacatgcgtgaaatgcatccaatctaccag
gctttagtcagtcttgtgaaggcctttgccatacaatttgccatggagaaaaaagagaga
ggcattgttgactttgccgatcttgaacatcttgcccttcatattttggtggaccatgag
aatcagaagagcgatattcgcccttccgatatcgctgtcggataccggaatcagttcaaa
gaggtgttggtggatgaataccaggatgtaaatatggttcaggaaacgattctccaactg
atttctgctgaaggtgaatatgacggaaacttatttatggtgggagatgtaaaacagtca
atataccggttccggctggcagagccgaacctgtttttggcaaagtacaaaagattttct
ccagacggattaaataacggtcttcgcattgatttatcccgaaatttccgtagtcggtct
gaagtccttgatggtacaaactttctttttaaacagatcatgggggtaagtgttggagaa
attgattacaacagagatgctgagctcgttcttggcgcaagttatccttctgatgaaaca
tatccgatagaagtggcgctcatcgatcagtcggaagaaaaatcagactctggcaataaa
ccggaggatggcggttttgacgaagaggaaattgagcaatcccgtttggaagcaaggtat
ttggcgaagaaaatcagggagatcattgatagtgaaaggcctatctatgactcgaaagca
ggcaggcatcgtccggcacaatataaagatattgtcattctcctaaggtcattaacttgg
gcacaagatatcatggatgaattcaagcatgaaggaattcctgtttatgcaaatctcact
tccggatatttcgaagccacagaggttgcggtgatgatgtctctattaaaggtcgtggac
aatccagatcaggatatccctatggcggcagtgctccgctctccgatcgtcggccttgat
gaagaggcattagcccaaattagggcgcagttcaggaaaggaagcttttacaatgcagta
aaaagcttcattaaaacttcgggtgattcaagtcatgaaatgatcagggaaaagcttgct
tcattctttgaaaatttgaatggatggagaagtatggcgcgaacaggggcactttcaagc
ctgatatggcaattgtatcgcgataccgggttttatgaatttgccggtggccttccaggt
ggcaaacaaaggcaagccaacttaagggcactttatgacagggcatcccaatatgaagag
acatccttcagaggactgttccgctttttgcgatttattgaaaggatgcaggaccggggc
aaggatctaggggctgcccgtgctctcggtgagcaggaggatgttgttcgactgatgacc
atccattcaagcaagggattggaattcccgattgtttttgcttccggcttagggcgcaaa
tttaatatgcaagatataaacagcgcatttttattcgataaagattatgggtttgccagc
aaatatattgattctgacaaaaggatatcttatccatcattgcctcaattagcgctaaag
agaaaaaagcggatggaattggctgcggaggaaatgagggttttatatgtagcacttaca
cgcgcaaaggaaaagctttttcttgtagggatagtgaaaaaccttgataaagagattaag
aaatgggcaaaagggagtattggcggcaattggctcctgaaagaatacgatagagcgtct
gctgcgacatacatggactggctcggcccggcaatcatcaggcacagggactgtagtatt
gacggaattcctgaaagctccacgggtgaaattaatgaacacccttcaagatggaaagtg
gaagtactgtcatcatccgacctgagtctaacagaagaagaatctgaagtagaatcagat
gggtggcttgaaatggtgaaagaaggccgtttaagcagtattcgttcacctttgaaggaa
aaggtattttcccggctaagttggagatatccacatttgattgctgcgaagaggatgtcc
aagcagacagtttcggaattgaagcggatggcggaattacaagatgatgcaagtgcagca
tctattttgggaggaagccgtacaactgctccaatcttcaacaaaccaaagtttctccaa
aagcaatccatatcgccagcagaacgagggaccgtcatgcatacagttatgcagaatgta
acccttgatgaagagccttcattgatttcaattgagcgattgctggatgaattgattcat
aaagagatacttacgcttgaacaggcagatgccgtatcggcggagcaaatagttcaattc
ttccaaaccgatctgggcaaaagggttttacattcaccaaaaactgaacgggaagtacct
ttcacaatgggaataccggcagaagaaatctatgaggactgggacggagaagatgaatct
gtcatcgtccagggaatcattgattgcatcattgttgaggagaatggagtcgttttacta
gattataaaacagatgccatcacgggacgattccctggaggcttcgaccaagcaaaaacc
gttcttgagaaaagatataaaacacaaatacatttatatgaacaggccatcgaaaagatc
tggaggaagcaagtgaaagaaaaatatttatacttcttcgatggcggacatcttttgaca
atgtaa
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integrated database retrieval system
