Bacillus freudenreichii: NCTC4823_02814
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Entry
NCTC4823_02814 CDS
T06767
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_02814 (addB)
Enzymes [BR:
bfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC4823_02814 (addB)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC4823_02814 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
VEF48728
LinkDB
All DBs
Position
1:complement(2870429..2873923)
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AA seq
1164 aa
AA seq
DB search
MSLRFVIGRTGTGKTALFYEEIRKKLTEQPDGPPILYIVPDQMTFLSEYELIQSNELTGM
IRAQVFSFTRLAWRIFQETGGASRNHVTSTGLNMLIKKIIEEHKKDLKLFRQASDKTGFI
QQVEQIFTEFKHYCVQPEDLAQKREEVGFFQSQKALSDKMHDLELIYRHFEEALSGKYLD
SNDYLSLLAESIDKSGYLQDAEVYIDGFHSFTPQEYLVIDRLMKTSRRVSVSLMLDRPFR
NETPDELNLFRMTGETYEKLYELASQGEIAVEEDVILREAFKFQNDSLKFLESKFESRPV
KSYADRPEINLMQAVNRRAEIEGIAREIRRLVMEEGYRYKDIAVLVRNANQYQGEMETIF
YDYEIPYFIDQKRSMLNHPLVELVRSVLEVINSNWRYEHVFRVIKTDLLFPPEGNLNSLR
EQMDRLENYVLAYGIKGGDWTKKGHWTYRRFRGLELAGMVQTDEEKEIEKELAVSRDIVT
LPILRLSRRLKKARTGRELCEAVYLFLEELEIPRKLEMLSETAEEKGELVTSREHDQAWN
DVMELLDQFVEILGDTKLTLEEFIPIINAGLEEMRFSLIPPAIDQVFVANFEQSRLSNIK
VSFVAGLNDGILPAKFSEGGVLSDEDRTSLMDAGMNIAPDSRRKLLNEEFVAYRAFTSAE
ERLLLSYPLADDEGKALQPSPYIDRIRAMFPEIVETAAVNDPAEVGNEDQFEYVSHPDSA
AAYLTGQLNLKKRNYPIADFWWDVYNFYMSDPHWKKKAERILSSLFFRNETKQLSEDTSK
QLYGENITASVSRMELFHSCPFSHFALHGLKLREREIYKLEAPHIGDLFHAALKWIADQV
NKNKLKWADLTKEQCEQLAREAVAHLAPKLQNQILLSSNRFYYIKRKLEQVIGRASYTMS
GHAKESGFSPVGIELAFGPRQQLPPLSFALKNGMKMELQGRIDRVDKAENDNGVYLRVID
YKSSSRELDLSEIYYGLSLQMLTYLDIIITYSKQLIGQEAFPAGVFYFHLHNPMIQSDKI
MTLSEIEEEIFKRFKMKGLVLEDPDLVRLMDFSLESGDSNIISAGLKKDGTLNARSKSAT
KEELGLLRRHVRSLYQESGNAIISGEVGIDPYRMKDKTPCKFCLYKPVCQFDPALPANEF
RLIHQEKREDVIARIREEGEELEN
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacgctttgtcattggccgtacgggaacgggaaaaacagctcttttttatgaa
gagattagaaaaaagctgaccgagcagccggatgggccgccaatcctgtatatcgttccg
gatcaaatgacttttttatccgagtatgaattgattcaatcaaatgaacttaccggaatg
atccgtgctcaagtattcagctttacccggcttgcgtggcgcatatttcaggagacgggc
ggagcaagccgtaaccatgtgacgagcaccggtctaaatatgcttattaaaaaaataatt
gaagaacataaaaaggacttgaagctatttaggcaggcatcagataaaacaggatttatc
cagcaggtggagcaaatcttcacggagttcaaacattactgtgtccagcctgaagatctc
gcacaaaaaagagaagaagtggggtttttccaatcccaaaaagccctttcggacaagatg
cacgacctcgaattgatttacagacattttgaggaggcattatcgggaaaatatttggat
tccaacgattatttgagcctgctggcggagtcgattgacaagtccggatatttgcaagat
gcggaagtgtatatagatggattccacagctttacaccccaggaatatttggtaatcgac
cgtctcatgaaaacaagcagaagggtatccgtttcccttatgctggatcgtccattcaga
aatgaaacgccggatgagctaaatcttttcagaatgacgggagaaacatatgaaaaatta
tatgagttggcatcccaaggagaaatagcggtcgaagaggatgtcattctcagagaagct
tttaaattccagaatgatagcttgaaattcttggagtccaagtttgaaagcaggccggta
aaatcatatgcagacaggcctgagataaacctgatgcaagctgtcaacagacgcgcggaa
atcgaaggcatagcgagggagatccggcgtctcgtgatggaagaaggatacaggtacaag
gatattgcagtcctggtgcgaaatgcgaaccaatatcagggtgagatggagacgatcttt
tatgattacgaaattccctacttcatcgatcaaaagcgctccatgctcaatcacccgcta
gttgaactggttcgatctgtactggaagtgatcaacagcaattggagatatgaacatgtt
tttcgcgttataaaaactgatttgctctttcctccggaaggtaatctgaatagtctcagg
gagcagatggacaggctggaaaactatgtattggcgtatggaatcaaaggcggggactgg
acgaaaaaaggacattggacataccgccggttccgcggccttgaactggcaggtatggtg
cagacggacgaagagaaagaaattgaaaaggagctggcggtatcgagggatatcgtcact
ctcccgatattaaggctttcaaggcgattgaaaaaagcgaggactggacgggagctttgc
gaagctgtttatctctttttagaagagctcgaaattccacgcaagctggaaatgctcagt
gaaactgcagaagaaaaaggggagcttgttacatcgagggaacatgatcaggcctggaat
gatgtcatggagcttctggatcagttcgtggaaatactcggggatacaaagttgacactg
gaggagtttatcccaatcatcaatgctggtttggaggagatgaggttttctttgatcccg
cctgccattgaccaagtgtttgtggctaactttgagcagtcacgcctttctaacattaaa
gtttcattcgttgctggattaaatgatggcatcctcccggcaaagttcagcgaaggggga
gtcctctcagatgaagaccggacatcgttaatggacgcaggcatgaatatcgcgccagac
agccgaagaaagcttctaaatgaagagttcgtcgcctacagggcgtttacatcagctgag
gagcgcctgctgctatcttatcctttggcagatgatgagggaaaagctcttcaaccatct
ccatatatagatagaataagagcgatgtttccagaaatcgttgaaacagctgcggtaaat
gatccggcggaagtgggcaacgaagatcagttcgaatatgtgtcccatcctgattcagcg
gctgcatatttgacagggcagctgaacttgaagaaaaggaattatcccatcgctgatttt
tggtgggatgtctataatttctatatgtccgatccacattggaaaaaaaaggctgaacgg
attctgtcaagtctgttctttagaaacgagacgaagcaactttccgaagatacgagtaaa
caactatacggcgaaaatattacggctagtgtatcaagaatggagcttttccacagctgt
cctttctctcattttgcgttacacggtttaaagcttcgtgagcgtgaaatctacaagctt
gaggcgccgcatatcggagatttgttccatgccgccttaaagtggattgcggatcaggtg
aacaagaataaattgaagtgggcagatctgactaaggagcagtgtgaacaactggccagg
gaagctgttgcccatctggccccgaaactgcaaaatcaaatcctattaagctccaatcgc
ttttactatattaaaaggaagcttgaacaggtgataggaagagcgtcatatacaatgagc
ggccatgcgaaggaaagcgggttttccccggtcgggatcgagcttgcttttggtccgaga
caacagctgccaccattgtcatttgcgctgaaaaatggtatgaaaatggaactgcagggc
cggattgacagggtggacaaagcggaaaatgacaatggggtttatttgcgggtcattgat
tacaaatcaagctcaagagagctggatctgagtgagatctattatgggctttcattgcag
atgctgacttatttggacatcatcattacttattcaaagcagttgattggccaggaggcc
tttccggcaggcgtattttatttccatctccataatccgatgattcaaagcgataaaatt
atgacactatcagaaattgaggaagagatattcaagagatttaaaatgaaggggcttgtt
cttgaagatccggaccttgtccgtttgatggacttctcccttgaatcgggtgattcaaac
attatttccgccggcttaaaaaaagacggaacacttaatgccagatcaaaatcagcaacc
aaagaagagctgggacttttgagaaggcatgtaagatccctttaccaagagtcaggaaat
gcaatcatatcaggagaagtgggcattgacccttatcggatgaaagataaaactccgtgc
aagttttgcttgtacaaaccggtttgccagtttgacccggctttgccggcaaatgaattc
cgcttgatccaccaggagaagcgagaagatgtcatcgcacgtatacgggaagaaggtgaa
gaacttgaaaactga
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