Bacillus freudenreichii: NCTC4823_03279
Help
Entry
NCTC4823_03279 CDS
T06767
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03420
Nucleotide excision repair
bfd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NCTC4823_03279 (pcrA)
03430 Mismatch repair
NCTC4823_03279 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_03279 (pcrA)
Enzymes [BR:
bfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC4823_03279 (pcrA)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC4823_03279 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NCTC4823_03279 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Terminase_6N
MSSS
Motif
Other DBs
NCBI-ProteinID:
VEF49166
LinkDB
All DBs
Position
1:complement(3353619..3355835)
Genome browser
AA seq
738 aa
AA seq
DB search
MGDDVQFLAGNLLEGLNKEQKEAVKTTEGPLLIMAGAGSGKTRVLTHRVAYLMLEKGVNP
YNILAITFTNKAAREMKDRIGKIIGDGARDVWISTFHSMCVRMLRRDIDRLGYNRNFSIL
DTTDQLSVIKGILKDKNIDSKKFDPRAMLGSISNAKNELITPEEYAKEAAGYYAQVVGDV
YTEYQRRLRRNHSLDFDDLIMVTIQLFERVPEVLEYYQRKFHYIHVDEYQDTNRAQYMLV
KLLAERFKNLCVVGDSDQSIYRWRGADIANILSFEKDYPSAKVILLEQNYRSTKKILEAA
NEVIQNNSNRKPKNLWTDNDHGENIMYYRADGEKTEAQFVAGKIKELTEGGKRDRSDIAI
LYRTNAQSRVMEEVLMKSNISYNIVGGTKFYDRKEIKDLLAYLRLIANPDDDISLQRIIN
VPKRGIGATSIDKIATYAGEQDISMFDALNVIDFIGVSPRIANASAAFHELMNNFAQMQE
YLSVTEIVEEVIEKSGYKEMLKAEKTLEAESRLENIEEFLSVTKSFEDGSEDKSLVAFLT
DLALVADIDQLDETDEASDAVTLMTLHSAKGLEFPVVFLIGLEEGIFPHSRSLMEEEEME
EERRLAYVGITRAEEELYLTNAHMRTLYGRTNMNPVSRFINEIPDELVEEVGAERRPTIS
FGFRENRPSPAKPVFRPAASEIDQAEWKVGDRAEHKKWGTGTVVSIKNDGGSVELDIAFP
SPVGIKRLLAEFAPIKKV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgatgatgtgcaatttttagccgggaaccttttggaaggcttgaataaggaacag
aaagaggcggtcaaaactacggaaggcccgttattgatcatggctggtgcaggaagcggg
aagacgagggttttgacccaccgtgtggcttatctgatgctggaaaaaggtgtaaatcca
tacaatattcttgcaatcacgtttacgaacaaggctgcaagagagatgaaggaccggatt
ggaaaaatcattggagacggagcgcgggatgtatggatatcaacattccactcgatgtgt
gtgcgaatgctgcgccgtgacatcgatcggctcggttacaaccgtaatttttccatcttg
gacacgaccgaccaactgtccgtcattaaaggtatcttaaaggataagaatatcgattcg
aagaaattcgatccaagagcgatgctagggtcaatcagcaatgcgaagaacgagctgatc
acgccggaggaatatgcgaaggaagctgcgggctactacgcccaagttgtgggcgatgta
tacactgagtatcagcgccgcttacgccgaaatcactcgctagatttcgatgatctgatc
atggtgacgatccaactgttcgaaagagtgccggaagtgctggaatattatcaaagaaaa
ttccactacatccatgtcgatgagtatcaggatacaaaccgtgcgcagtatatgttggtc
aagctgcttgccgagcgctttaaaaacctgtgtgtcgtcggagactctgatcagtcgatc
tacagatggcgcggggcggatattgcaaatatcctttcttttgaaaaggattatccgagc
gcgaaggtcattttattggagcaaaattaccgttcaactaaaaagattcttgaagctgcg
aacgaagtcatccaaaacaactcgaaccgcaagccgaaaaatttatggacggacaacgac
cacggagaaaacatcatgtattaccgtgcggatggggagaaaaccgaagcgcagtttgtg
gccggaaaaataaaggaactgacagaaggcgggaaaagggatcgctcggatattgccatc
ctttaccgtacaaacgcccaatcccgtgtcatggaagaagttttgatgaaatcaaatata
tcctacaacattgtgggcggaacaaaattctatgacagaaaagaaatcaaggatttgctt
gcctacttaaggctgattgccaatcctgatgacgatataagccttcaacggatcatcaac
gtaccgaagcggggaattggggcaacttcaatcgataagattgcaacgtatgcaggcgag
caggatatctcgatgttcgacgcattgaatgttatcgattttatcggtgtcagccctaga
atcgccaatgcttcagcggctttccatgagttgatgaataatttcgctcaaatgcaggaa
tatctttccgtgacagagattgtggaagaggttattgaaaagtccggatataaagagatg
ctcaaggcagagaagacacttgaagctgaaagccgtctggaaaacattgaggaatttttg
tccgtaacaaagagctttgaagacggcagtgaagataaaagcctggtcgcattcttgact
gacctggcgctggttgctgatatagatcagctggatgaaacggacgaagccagcgatgcg
gtgacactcatgaccttgcactctgcaaaaggacttgagtttccggttgtatttttaatc
ggactggaagaaggcatcttccctcacagccgctctttaatggaagaggaagaaatggag
gaagaacgacgccttgcctatgtaggaatcacaagagcggaagaggaactgtatttgacg
aacgcgcatatgcggaccctctacgggcgtacaaatatgaatccagtttcccgctttatc
aatgaaataccggatgagcttgtggaagaggtgggagcagagcggcggccgaccatatcc
ttcgggttcagggaaaaccggcctagccctgcaaagcctgttttccgtccggctgcttct
gagatcgaccaggccgaatggaaagtcggagacagggcagaacataaaaaatggggcaca
ggaactgttgtcagcattaaaaacgacggtgggagcgtcgaactcgatatcgcttttcca
agtcctgtcggcatcaagcgactgctagctgaattcgctccaatcaagaaagtctaa
DBGET
integrated database retrieval system
