Bacillus freudenreichii: NCTC4823_03967
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Entry
NCTC4823_03967 CDS
T06767
Symbol
gabR_3
Name
(GenBank) putative rhizopine catabolism regulatory protein mocR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
bfd
Bacillus freudenreichii
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bfd03000
]
NCTC4823_03967 (gabR_3)
Transcription factors [BR:
bfd03000
]
Prokaryotic type
Helix-turn-helix
GntR family
NCTC4823_03967 (gabR_3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
Asp_aminotransf
HTH_11
HTH_41
HTH_24
HTH_36
MarR_2
Rho_N
TrmB
MarR
HTH_Crp_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
VEF49819
LinkDB
All DBs
Position
1:4120812..4122257
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AA seq
481 aa
AA seq
DB search
MDQYKNGVNFMDICPQLDSQSNEPLYLQLYHYFKEEIQSGGIPSFKRLPSIRELADDLHV
SKTTIQTAYQQLLAEGYIESKERSGYFVVEIENEPFGNLPHLSQPPSVKNHFSSEKEILI
DFYLSGTDVNHFPFDKWKTCMNQSLDQDFLSYGDKRGEIGLCSALSDYLRQARAVNCTSE
QIVMGAGTQTTVRLLCQLIGMDGKKIALEEPGYQGVRHVFQELGFEVVPIKLEDDGINLE
ELEKSGAKVVYITPSHQYPLGMVMPITKRIKLLQWAEENGGLIIEDDYDGEFRYHGKPIP
SLQGLDACGNVIYAGTFSKSLMPAIRMSYFVLPTKLLDRYQEKLSIYDQTVSRLHQRSLQ
LFMESGEWQRHIRRMRKIYAKKHDLLLHTIKSVMGDYVEITGQNAGLHIAMQVNSAKSAD
ELVQIAEEAGVKVYSTTANWISDQEQGAPLILLGFGGLSEKQIIDGIEQIHKSWLPYYLM
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttggaccagtacaaaaacggggtgaatttcatggatatatgtccacaattggatagtcaa
tcaaatgaaccgttgtatttacagctctatcactacttcaaggaggagattcagtcagga
ggaatcccttccttcaagcggctgccgtccatccgtgaacttgccgatgatttgcatgtt
agcaaaacaaccattcagacagcataccagcagctccttgcggaaggttatatcgaaagc
aaagagcgaagcggatattttgtggttgaaattgaaaacgagccattcgggaatctgcct
catctatcgcagccgccgtctgttaaaaatcacttttctagcgaaaaagagatcctaata
gatttttatttgtcaggcactgatgtgaatcattttccttttgacaaatggaaaacgtgc
atgaatcaaagcctggaccaggatttcctttcatacggggataaacgaggggagattggc
ctctgctcggcattaagtgattaccttcgtcaggcacgagcggtgaactgcacatcagag
caaattgtcatgggtgctggaacacaaacaaccgtgaggctgctatgccagttaatcgga
atggatgggaaaaagattgctttggaagaaccggggtaccagggagttcgccatgttttt
caggaactgggtttcgaagtcgttcctatcaaactagaggatgacggaatcaatctcgag
gaattggaaaaaagcggcgcaaaagtggtctacatcacgccttcacatcaatacccgcta
ggaatggttatgccaattactaagcggatcaaacttttacaatgggcggaagaaaatgga
ggattgattatcgaagatgattatgacggggaattccgctatcatggaaaacccattcct
tccttgcagggactggatgcctgtggaaatgtcatttatgccggaactttttcaaaatca
cttatgccagccataagaatgagctattttgtgcttcctacaaagcttttggatcgatat
caggaaaaattgagtatatatgaccaaaccgtgtcacggcttcatcaaaggtcattgcag
ctatttatggaaagcggcgaatggcagcggcatattcgtagaatgagaaagatttacgcg
aaaaagcatgacctgttgctacatacgattaaaagcgtcatgggagattatgttgaaatc
accgggcaaaacgctgggttgcatattgccatgcaggtgaacagtgctaaaagtgcggac
gaattggttcaaatagcagaagaagcgggggttaaagtatacagcacaactgccaactgg
atatctgatcaggagcagggggctccgctcattttactgggatttggcggtttgtctgaa
aaacagattatcgatgggattgagcagattcataagtcatggctgccttattatcttatg
gaataa
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