Bacillus freudenreichii: NCTC4823_04065
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Entry
NCTC4823_04065 CDS
T06767
Symbol
rpoA
Name
(GenBank) RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NCTC4823_04065 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfd03021
]
NCTC4823_04065 (rpoA)
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_04065 (rpoA)
Enzymes [BR:
bfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NCTC4823_04065 (rpoA)
Transcription machinery [BR:
bfd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NCTC4823_04065 (rpoA)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NCTC4823_04065 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
DUF961
Motif
Other DBs
NCBI-ProteinID:
VEF49905
LinkDB
All DBs
Position
1:complement(4209088..4210032)
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETIEISEDARFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITSIQIEG
VQHEFSTVEGVVEDVTSIILNLKKLALKIYSEEEKTLEIDVQGEGEVKASDIMHDSDVEI
LNPDLHIATLAANANFRVRMSAQRGRGYTPADLNKRDDLPIGVIPIDSIYTPVSRVNYQV
ENTRVGQMTNFDKLSLDVWTNGSISPEEAISLGAKILTEHLNIFVGLTDEAQHAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
GKLDELGLELRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgagattgaaaagccaaaaatagaaacgattgagatcagcgaagacgccagattc
ggaaagtttgttgttgaaccccttgagcgtggatacggtacaactttgggtaactcctta
cgtcgtattctactatcctcactcccaggtgctgcgatcacttctattcaaatagaaggt
gtccaacatgaattttcaaccgttgaaggggtcgtcgaagatgttacctctatcatcctt
aatctaaaaaaactagccttgaaaatatattcggaagaagaaaagacattggagattgat
gtgcagggcgaaggggaagttaaagcttccgatattatgcatgacagtgatgttgaaatt
ttaaatcctgatctgcatatcgctacacttgcagccaatgcgaatttccgtgtccgcatg
tccgctcagcgcgggagaggctatacgcctgctgatttgaacaaacgtgacgatcttcct
atcggtgtcattcctatcgactctatttatacgcctgtatcacgtgtaaactatcaggtg
gaaaatactcgtgtgggccaaatgacaaactttgataagctatcgctcgatgtttggaca
aatggcagcatcagcccggaagaagcgatttctctcggtgcgaaaattttaacagagcac
ttaaatatctttgtcggtttgacggacgaagctcagcatgctgagatcatggttgaaaag
gaagaagatcaaaaggaaaaagttctggagatgactatcgaagaactggatctttctgtt
cgttcctacaactgcttgaagcgtgcaggaatcaacacggttcaggagctggccaacaag
acagaggaagatatgatgaaagtgcgtaacttgggaagaaaatcgttggaggaagtaaaa
ggcaagctcgatgaacttggcctcgaactccgtaaagacgactaa
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