Bacillus freudenreichii: NCTC4823_04195
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Entry
NCTC4823_04195 CDS
T06767
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
bfd
Bacillus freudenreichii
Pathway
bfd03030
DNA replication
bfd03430
Mismatch repair
bfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC4823_04195 (dnaX_2)
03430 Mismatch repair
NCTC4823_04195 (dnaX_2)
03440 Homologous recombination
NCTC4823_04195 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfd03032
]
NCTC4823_04195 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
bfd03400
]
NCTC4823_04195 (dnaX_2)
Enzymes [BR:
bfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC4823_04195 (dnaX_2)
DNA replication proteins [BR:
bfd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC4823_04195 (dnaX_2)
DNA repair and recombination proteins [BR:
bfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC4823_04195 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
TIP49
DnaX_C
AAA_30
AAA_assoc_2
AAA_5
AAA_19
AAA_7
AAA_16
Rad17
AAA_24
Mg_chelatase
PIF1
DNA_pol3_delta_C
DUF815
AAA_14
TsaE
AAA_28
RNA_helicase
RCF1-5-like_lid
Motif
Other DBs
NCBI-ProteinID:
VEF50030
LinkDB
All DBs
Position
1:complement(4323599..4325296)
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AA seq
565 aa
AA seq
DB search
MSYQALYRVWRPQSFADVIGQEHVTKTLQNALLHQKISHAYLFSGPRGTGKTSAAKIMAK
AVNCEKMPVSEPCNECPACRGITDGSVPDVIEIDAASNNGVEEIRDIRDKVKYTPNAVKY
KVYIIDEVHMLTIGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFKRITA
QDISKRMVHIANETSLEYDEKALQTIARAAEGGMRDALSLLDQAISFSTGKVTVEDALTV
TGSISQNSLNKLARAIFEKKISEALGTLEELLMQGKDPSRFVEDFILYFRDLLLYKTAPN
LDEVAEQALQDEEFKTLSEEILPQQIYEYIDILSKTQQEMRFSNHARIYLEVCLVKLCQT
ERAQTQVDGPQFQELYKKIEALEKEIKWLKSNSQPVGDSAPKQPAQAPRRPARNAGKEFR
VSPGVVTQVLKEATRQQLNDVKSHWGEFLNILNERQMRSQAALLNDAEPAAASADAIVVK
FKYDIHCQMAMENHTFIQTISQILESQTGTDFKIIGVPEVQWKEIREQFLQTSKNEGDEI
TAEEQDPLVSEALKLVGKDLLEIKK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgagttaccaagcgctatatcgggtgtggcggccgcaatcatttgcggatgtcatcggg
caggaacatgtgacgaaaacgttgcaaaatgctctcctccaccaaaaaatatcgcacgcc
tatttgttttccggccctcgcggaaccggaaaaacaagtgcagccaaaataatggcaaaa
gccgtgaactgtgaaaaaatgcctgtatctgaaccgtgcaatgaatgtcccgcctgccgg
ggaattaccgacggttcagtgccagatgtcattgaaattgacgcggcctccaataatgga
gtggaggaaatccgtgatatccgtgacaaagtcaagtacacacccaacgcggtgaagtat
aaagtctatatcattgacgaagtgcatatgcttacgattggcgcattcaatgctttgctg
aaaacattggaagagccgccgaaacatgttattttcatattggctacaacagagccacac
aaaattcctttaaccatcatttccagatgccagcgttttgattttaaaagaatcactgcc
caggatatatcaaagcggatggtccatattgcaaatgaaacgtcattggaatatgatgaa
aaggcgctgcaaaccattgcaagagctgcagaaggcggaatgagggatgcactgagcctg
ctggaccaagctatttctttcagcaccgggaaagtcactgtagaagatgctttgacggtc
accggctcgatttcgcaaaacagtttgaacaagcttgcgcgagccatctttgaaaagaag
atctccgaagctttaggcacccttgaggagctccttatgcaggggaaagatccctctcgg
tttgtagaggattttatcttgtatttccgcgaccttcttctttataaaacagccccgaat
ttggatgaagtagctgagcaagcccttcaagatgaagaattcaaaactctttcggaagag
attttgcctcagcaaatctatgaatacattgatatattgagcaaaacccagcaggagatg
cgtttttcgaatcatgcgcggatttatctggaagtatgcctggtaaagctttgccagact
gaaagagcccaaacgcaggtggatgggccgcaatttcaggaactatataagaaaatcgag
gcccttgaaaaggaaatcaagtggttgaaaagtaatagccaacctgtcggggacagcgct
ccgaaacagccggcgcaggctccaaggagaccggctagaaatgccggaaaggaattccga
gtcagcccgggcgttgttacacaggtgttgaaggaagctacaaggcagcaattaaatgat
gtaaaaagtcattggggtgaatttttgaatatattgaacgagcggcaaatgcgttcccag
gcagcccttcttaatgatgcagaaccggctgcagcatctgcggatgccattgtcgtgaag
ttcaaatatgacatccactgccaaatggcgatggaaaatcatacatttatccaaacaatc
tctcaaatactggaaagtcaaacaggaaccgattttaaaattatcggtgttcccgaagtt
cagtggaaagagatccgtgagcaatttttacaaacaagcaagaatgaaggcgacgaaatc
actgcagaggaacaggatccactcgtttctgaagctttgaaacttgtcggaaaagatctt
ctagaaataaaaaaataa
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