Bacteroides faecis: K6V30_02005
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Entry
K6V30_02005 CDS
T07899
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bfe
Bacteroides faecis
Pathway
bfe02020
Two-component system
bfe02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K6V30_02005 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
K6V30_02005 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfe03021
]
K6V30_02005 (rpoN)
Transcription machinery [BR:
bfe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
K6V30_02005 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
HTH_12
LacI
Rx_N
Motif
Other DBs
NCBI-ProteinID:
UBE45667
LinkDB
All DBs
Position
complement(377328..378812)
Genome browser
AA seq
494 aa
AA seq
DB search
MAQGSRQIQSQAQQQIQTLSPQQILVVKLLELPAVELEDRIHAELLENPALEEGKEDTAA
DEYAEDVNSEEGMDNDANDYDSLSDYLTEDDIPDYKLQENNRSRDEQAEDIPFSDTTSFY
EILKEQLRERNLTEHQCELVEYLIGSLDDDGLLRKSLESICDELAIYAGIESTEEELEEA
LCILQDFDPAGIGARSLQECLMIQILRKKSEEKKPAPILDLEERIISDCYEEFTRKHWEK
IIKKLDVKEETFSEAIAEITKLNPRPGASLGEAIGRSFQQIVPDFLVDTYDDGTINISLN
NRNVPELRMSRDFTEMVEEHTKNKANQSKESKEAMMFLKQKMDAAQGFIDAVKQRQNTLM
TTMQAIIDLQRPFFLEGDESLLKPMILKDVAERTGLDISTISRVSNSKYVQTNFGIYPLK
FFFSDGYTTEDGEEMSVREIRKILKECIDGEDKKKPLTDDELADILKEKGYPIARRTVAK
YRQQLNIPVARLRK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaggttcccgtcaaatacaatcgcaggcgcaacagcagatacaaacgctctcg
ccacagcagattctggtcgtgaagctgttggagcttcccgcagtcgagctggaagaccgt
atccatgctgaactattggagaatccggcgcttgaagaaggtaaagaagacactgctgcc
gatgaatatgcagaagatgtcaactcggaagaaggcatggataacgatgccaacgattat
gattcattaagcgattatctcaccgaagacgatattcccgactataaattgcaggagaac
aaccgctcgcgggacgagcaggcggaagatattcctttctccgatacaacttctttttat
gaaattctgaaagaacaacttcgtgaacgtaacctgaccgaacatcagtgcgaactggta
gaatacctgatcggttcgctggacgacgacggactgcttcgcaaatcgctggagagtatc
tgcgatgaactggctatttatgccggcatcgaatctacggaagaggaactggaagaggct
ctgtgcatcttgcaggattttgatccggcaggtatcggagcacgtagtcttcaggaatgc
ctgatgatacagatcctccggaaaaagagcgaggagaaaaagccggcaccgatactggac
ttggaagaacgtatcatcagtgattgttatgaagaattcacccgaaaacactgggagaag
atcatcaagaaactggatgtgaaagaagaaactttcagtgaggcgattgccgagatcacc
aagttgaatccccgtccgggtgcttcgctcggagaggctatcggaagaagctttcagcaa
atagttcctgattttctggtggacacctatgacgacggaaccattaacataagcctgaat
aaccgtaatgttcccgaactccgtatgagtcgtgactttaccgagatggtggaggaacat
accaaaaataaggcaaaccagtccaaagagtcgaaagaagccatgatgttcctgaagcag
aagatggatgccgcgcagggatttattgatgcggtgaaacagcggcagaatacgctgatg
accactatgcaggcgattatcgacttgcagcgtcctttcttcctggagggtgacgagtca
ctgttgaaaccgatgattctcaaagatgtggcagaacgtaccggactggatatttccacg
atttcccgtgtcagcaacagcaaatatgtacagactaacttcggtatctatccacttaaa
ttctttttcagtgatggttacacgacggaggacggagaagagatgtccgtacgtgagatc
cgtaagattctgaaagaatgcattgacggggaggacaaaaagaaaccgctgacagatgat
gaactggcagatatcctgaaagaaaaaggctatcctattgcccggaggacggtggcaaaa
taccgtcagcagctgaatataccggtggcaaggctgaggaaatga
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