Bacteroides faecis: K6V30_02150
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Entry
K6V30_02150 CDS
T07899
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
bfe
Bacteroides faecis
Pathway
bfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V30_02150 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfe03019
]
K6V30_02150 (pnp)
03016 Transfer RNA biogenesis [BR:
bfe03016
]
K6V30_02150 (pnp)
Enzymes [BR:
bfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
K6V30_02150 (pnp)
Messenger RNA biogenesis [BR:
bfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
K6V30_02150 (pnp)
Transfer RNA biogenesis [BR:
bfe03016
]
Prokaryotic type
tRNA degradation factors
K6V30_02150 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
MazE_antitoxin
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UBE45695
LinkDB
All DBs
Position
complement(417110..419236)
Genome browser
AA seq
708 aa
AA seq
DB search
MINPIVKTIELPDGRTITLETGKLAKQADGSVMLRMGNTMLLATVCAAKDAVPGTDFMPL
QVEYKEKFAAFGRFPGGFTKREGRASDYEILTCRLVDRALRPLFPDNYHAEVYVNIILFS
ADGIDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFVINPTFDQLEKADMDLMV
AATYDNIMMVEGEMHEVSEAELLEAMKVAHEAIKVHCKAQVELMEEVGKTVKREYNHEVN
DEELRKAVREACYDKAYAVAASGNNNKHERFEAFDAIREEFKAQFSEEELEEKAALIDRY
YHDVEKEAMRRSILDEGKRLDGRKTTEIRPIWCEVGPLPGPHGSAIFTRGETQSLTSVTL
GTKLDEKIIDNVLEHGKERFLLHYNFPPFSTGEAKAQRGVGRREVGHGHLAWRALKGQIP
ADYPYVVRVVSEILESNGSSSMATVCAGTLALMDAGVKIKKPVSGIAMGLIKNPGEEKYA
VLSDILGDEDHLGDMDFKVTGTRDGITATQMDIKVDGLSYDILERALNQAKEGRMHILDK
ITETIAEPRADLKDHAPRIETMTIPKEFIGAVIGPGGKIIQGMQEETGAVITIEETDGVG
RIEVSGTNKKCIEDAMRMIKAIVAVPEVGEVYKGKVRSIMPYGAFIEFLPGKDGLLHISE
IDWKRLETVEEAGIKEGDEIEVKLIDIDPKTGKFKLSRKVLMPRPEKK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgattaacccaattgttaagacgatcgagttacctgatggaagaaccatcacactcgag
acgggaaagttggcaaaacaggcagacggttctgtaatgctacgcatgggaaacaccatg
ttattagctactgtttgtgccgctaaagatgcagttcccggaacagatttcatgccttta
caggtagagtacaaagaaaaatttgcggcattcggccgttttcctggtggtttcaccaag
agagagggtagagcttctgattatgagattctgacttgccgtctcgtagaccgtgctctc
cgtccactattccctgataattatcacgcagaagtatatgtaaacatcatccttttttct
gctgacggtatagacatgccggatgcactggccggacttgcagcttctgcagcactcgct
gtttcagatattcctttcaacggaccgatttctgaggtacgtgtagcacgtatcgatggt
caatttgtaattaatcctacttttgatcaactggaaaaagctgatatggacctgatggta
gccgctacttatgataacatcatgatggtagaaggtgaaatgcacgaggtatccgaagct
gaattgctggaagcaatgaaggtggctcacgaagctatcaaggttcattgcaaggctcag
gtggagttgatggaagaagtaggaaagacggtgaaacgtgaatataatcatgaagtaaac
gacgaagaattgcgcaaggcagttcgtgaggcttgctatgacaaggcttatgccgttgct
gcttctggaaataataataagcacgaacgtttcgaagcttttgatgctatccgcgaagag
ttcaaggctcagttctctgaagaagaactcgaagagaaagctgcgctgatcgaccgttac
tatcatgatgtagagaaagaagctatgcgtcgttctattttggatgaaggcaagcgtctg
gatggtcgtaagactacggaaattcgcccgatctggtgcgaagttggccctctgcctggt
cctcacggatctgctatctttactcgtggtgaaactcaatctctgacttctgtcactctg
ggtaccaagctcgacgaaaagattatcgacaatgtattggaacatggaaaagaacgtttc
ctgttgcattataacttccctcctttctctacaggtgaagcaaaggcacaacgtggtgta
ggccgtcgtgaagttggtcacggtcatttggcttggcgtgctttgaaaggacagattcct
gctgactatccgtacgtagtacgtgttgtttcagaaatcctcgaatctaacggttcttct
tctatggctaccgtatgtgccggaacactggcattgatggatgccggtgtgaagatcaaa
aaaccggtatcaggtatcgctatgggattgatcaagaatccgggcgaagaaaaatatgca
gtattgtctgacatcctcggtgacgaagaccacctcggagatatggacttcaaagtaacc
ggaacaagagacggtatcacagctactcagatggacatcaaggtagacggtctttcttat
gatattctggaacgcgctttgaatcaagctaaagaaggacgtatgcacatcctcgataag
atcactgagactatcgccgaaccgcgtgctgacctgaaagaccatgctccccgcattgaa
acaatgactattcctaaagaatttatcggagctgtaatcggccctggtggaaaaatcatt
caaggtatgcaggaagaaaccggtgcagtgatcactatcgaagaaacagatggtgtagga
cgcatcgaagtttccggaacaaacaagaaatgcattgaagacgctatgcgcatgatcaag
gcaatcgttgctgttcccgaagtaggtgaggtatataaaggtaaagttcgctctatcatg
ccttacggtgcattcatcgaattcctgccgggcaaagacggtttgttgcacatttccgag
atcgactggaaacgtctggaaacagtagaagaagccggaattaaggaaggtgatgagatt
gaagtgaaactgatcgacatcgatccgaagacaggaaaattcaaactttcaagaaaagtg
ttgatgccaagaccggaaaagaagtaa
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