Bacteroides faecis: K6V30_03205
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Entry
K6V30_03205 CDS
T07899
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bfe
Bacteroides faecis
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfe03032
]
K6V30_03205 (topA)
03400 DNA repair and recombination proteins [BR:
bfe03400
]
K6V30_03205 (topA)
Enzymes [BR:
bfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K6V30_03205 (topA)
DNA replication proteins [BR:
bfe03032
]
Prokaryotic type
DNA Topoisomerases
K6V30_03205 (topA)
DNA repair and recombination proteins [BR:
bfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K6V30_03205 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
UBE45879
LinkDB
All DBs
Position
660868..663216
Genome browser
AA seq
782 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGKDFKVLSSYGHIRDLKKKEFSIDVDKNFKPAYEIPADK
KALVNTLKAEAKEAETVWLASDEDREGEAIAWHLYEVLKLKPENTKRIVFHEITKGAILK
AIEQPRDIDLNLVNAQQARRILDRIVGFELSPVLWRKVKPSLSAGRVQSVAVRLIVERER
EIHAFKSEAAYRVIAVFLVPDTDGKLVEMKAELSRRIKTKEEAKAFLNACQGATFTIEDI
TTRPVKKTPPAPFTTSTLQQEAARKLGYTVAQTMMIAQRLYESGFITYMRTDSVNLSEYA
TASSKDAIIHMMGERYVHPRHFETKTKGAQEAHEAIRPTYMENQSIDGTAQEKKLYDLIW
KRTIASQMADAELEKTTATISISKSGEVFTAVGEVIKFDGFLRVYRESYDDESEQEDESR
LLPPLKKGQKLEYGPIVATERFTQRPPRYTEASLVRKLEELGIGRPSTYAPTISTIQQRE
YVEKGNKDGEERTFNVLTLKDSQIKDEDHSEITGAEKSKLFPTDTGTVVNDFLTEYFPDI
LDYNFTASVEKEFDEIAEGEVQWTSIMKTFYDQFHPSVEKTLSIKTEHKVGERILGEEPG
TGKTVSVKIGRFGPVVQIGTVDDEEKPRFAQMKKGQSMETITLEEALELFKLPRTIGEYE
GKTVSVGIGRFGPYIQHNKVYVSLPKTLDPMKVTLEEAEQLILEKRAKEAERHIKKFDEE
PDMEILNGRYGPYIAYKGNNYKIPKDIVPQDLSLKSCLELVRIQDEKGPSTSSKGKRTAK
KK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaaaccttgtcattgtcgagtctccggcaaaagcaaaaacgattgaaaaattt
ctcgggaaagatttcaaagtcctttctagttacggacatatacgcgatctgaagaagaaa
gaattcagcatcgacgtagataagaattttaaacccgcttatgaaattccggcagacaaa
aaggctttggtcaacacgctgaaagcagaagcgaaagaggcagaaaccgtatggctcgca
tccgatgaggaccgcgagggagaagcgatcgcctggcatctgtatgaagtattaaaacta
aaaccggaaaacacaaaacgaatcgtctttcacgaaattactaaaggcgctattttaaaa
gcaatcgaacaaccacgcgatatcgacctcaacctcgtaaatgcgcaacaggcacgacgg
attctggatagaattgtaggttttgagttatctcccgtactctggagaaaagtaaagcct
tctctgtcggctggtcgtgtacagtcagtagctgtccgtctgattgtagaacgtgaacga
gagattcatgccttcaaatcagaagctgcttaccgggtgatagctgtatttcttgtcccc
gatacagacggcaaactggtagaaatgaaagctgaactatcccgccgtatcaaaacaaaa
gaagaagcaaaagcattcctgaacgcatgtcagggagcgactttcacgattgaagatata
actacccgtccggtcaagaagacaccgccggctccgtttactacttccaccctgcaacag
gaagcagcccgcaaactgggatatactgtagcacaaacaatgatgatcgcacagcgtttg
tacgaatccggattcatcacttatatgcgtacagactccgtcaacctgtcggaatatgca
acagcaagtagtaaggatgccatcatccatatgatgggtgagcgttatgtacatccccgt
cactttgaaacaaagactaagggagcacaggaagcgcacgaggcaattcgcccgacttac
atggaaaatcaatccatcgatggtacggcacaggaaaagaaattgtatgacctgatctgg
aaacgcaccattgcctcgcaaatggcagatgcggaactggaaaagactactgctaccata
tctataagtaaaagcggcgaagtattcactgctgtcggtgaagttatcaagtttgatggt
ttcctgcgtgtatatcgtgaatcttatgacgacgagagtgaacaagaggatgaaagccgg
ctgttacctcctttaaagaaagggcagaaactggaatatggtccgattgttgccaccgaa
cgtttcacccaacgtccaccgcgttatacggaagcaagccttgtgcgcaaactggaagaa
ttgggtatcggtcgtccttcaacctatgcgcctaccatttctactattcagcaacgtgaa
tatgtagagaagggcaacaaggatggcgaagaacgtacattcaatgtgctgacgctgaaa
gacagccagatcaaagatgaagatcatagcgaaattacaggtgcggagaagtccaaactc
tttcctacagataccggaacagtagtaaacgatttcctcaccgaatacttcccggacatt
ctggattataactttaccgccagtgtagaaaaggaatttgacgagattgcagaaggagaa
gtacaatggacttctatcatgaagactttctatgatcagttccacccgtcagtagaaaag
acattatctataaagacagaacataaagttggcgaacgtattttaggagaagaacccggc
acaggaaagactgtttctgtaaaaatcggtcgtttcggccctgtagtacaaatcggtacg
gtagatgatgaagaaaagccacgtttcgcacaaatgaagaaaggccagtccatggaaaca
attacattggaggaagcattggaactgttcaagttaccacgtactattggtgaatatgaa
ggaaagactgtcagtgtaggtataggtcgttttggcccttatatccagcataacaaagta
tatgtatcactgccgaaaacacttgatccgatgaaagttactttggaagaagcagagcaa
ctgattctggaaaaacgggcaaaagaagcagaacggcacatcaagaagtttgatgaagaa
ccggatatggagattctgaatggccggtacggaccttacattgcttacaaaggcaataat
tacaagattcccaaagatattgttccgcaggatttgagtctgaaaagctgcctggaatta
gtcagaatacaagacgaaaaaggtccgagcacttcttccaaaggcaaacgaactgccaag
aagaaataa
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