Bacteroides faecis: K6V30_08135
Help
Entry
K6V30_08135 CDS
T07899
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bfe
Bacteroides faecis
Pathway
bfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V30_08135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfe03019
]
K6V30_08135
03400 DNA repair and recombination proteins [BR:
bfe03400
]
K6V30_08135
Enzymes [BR:
bfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K6V30_08135
Messenger RNA biogenesis [BR:
bfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6V30_08135
DNA repair and recombination proteins [BR:
bfe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6V30_08135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
HTH_9
HEM4
HTH_Crp_2
AAA_lid_At3g28540
Pico_P2B
KGK
UDPGT
MC7
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UBE46760
LinkDB
All DBs
Position
complement(2044987..2046891)
Genome browser
AA seq
634 aa
AA seq
DB search
MNKYQEILKQYWGYDSFRDLQEEIITSIGEGKDTLGLMPTGGGKSITFQVPALAQEGICI
VITPLIALMKDQVQNLRKRGIKALAIYSGMTRQEILTALENCIFGNYKFLYISPERLDTE
IFRTKLRSMKVSMITVDESHCISQWGYDFRPAYLKIAEIRELLPGVPVLALTATATPEVV
KDIQTRLNFREGNVFRMSFERKNLAYIVRKTDNKTKELLHILQRISGSAIIYVRNRRRTK
EITELLTNEGITADFYHAGLDNAVKDLRQKRWQSGEVRVMVATNAFGMGIDKPDVRIVLH
LDLPDSPEAYFQEAGRAGRDGEKAYAVILYAKSDKMTLHKRIVDTFPEKEYILNVYEHLQ
YYYQMAMGDGFQCIREFNLEEFCRKFKYFPVPVDSALKILTQAGYLEYTDEQDNSSRILF
TIRRDELYKLREMGKEADALIQTILRSYTGVFTDYAYISEESLALRTGLTRQQIYNILVT
LTKRRIVDYIPRKKTPYIIYTRERLDLRFLHIPPIVYEERKARYEARIKAMEEYVTTENV
CRSRMLLHYFGEKNEHNCGQCDVCLSNRASNDLSEKSYEELKRQILELLGQSPLTPAEIA
DKIKAEKEDIGQVIRYLLDEDGLKMQDGMLHISK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgaataagtatcaggagatattaaaacaatactggggttatgactccttccgcgacttg
caggaggagatcattaccagtatcggcgaaggcaaagacacactgggactgatgcctacc
ggaggcggtaagtctattacatttcaagtgcccgctctcgctcaggaaggtatttgtatc
gtcatcaccccacttatcgccttgatgaaagatcaggtgcagaacttgcgaaaacgggga
atcaaagcccttgccatctattcgggcatgacacggcaagaaatacttaccgcactcgaa
aactgcatcttcggcaattacaagttcctttatatctctccggaacggctggatacggaa
atattccgtaccaagttgcgttcgatgaaagtctccatgattacggtggacgaaagccac
tgtatctcacaatggggatacgacttccgcccggcatatctgaaaatcgcagaaatacgg
gagctgttgcctggagtaccggtactggcactgacagctacagcaactcccgaagtcgta
aaagatatccagacccgactgaacttccgggaaggaaatgtctttcgcatgagctttgaa
cgaaagaatctggcatatatcgtacgcaaaacggataacaaaaccaaagaattgctgcat
atcctccaacggatatcgggcagtgcaattatctacgtccgcaacagacgccgcaccaaa
gaaatcaccgaactgttgacaaacgaaggaataaccgccgacttttatcatgccggcctg
gacaatgccgtcaaagaccttcggcaaaaacgctggcaaagcggagaagtccgtgtcatg
gtggcaaccaatgctttcggcatgggtatcgacaagcccgatgtacgtatcgtgctgcat
ctcgacctgcccgattcacccgaggcctattttcaggaagccggacgtgccggaagagac
ggagagaaagcttatgccgtcatcctgtacgccaaatccgacaagatgacactccacaaa
cgtattgtcgacacctttcccgaaaaagaatacatcctgaatgtctacgaacatcttcag
tattattatcaaatggcgatgggtgacggatttcaatgtatccgggaattcaatctggaa
gaattttgccggaagttcaaatacttcccggtgccggtagacagtgccctgaaaatactg
acacaggctggctatctggaatacacggacgaacaggataattcatcacgaatcctcttt
accatccgtcgggacgaactgtataaactacgggaaatgggaaaagaagcggatgccttg
atacaaacgattcttcgttcgtatacgggagttttcactgattatgcctatatcagtgaa
gaatcgcttgccctacgcaccggactgacacgccagcaaatctataacatactggtaaca
ttaaccaaacgccgcatcgtcgattacattccccgcaaaaagactccttatattatatat
acacgcgaacgattggatctgcgctttctgcacattccccctattgtctacgaagagcgc
aaggcacgctatgaagcacgtatcaaggctatggaagaatatgtcactaccgaaaacgta
tgccggagccggatgcttctccactacttcggagagaaaaacgaacataactgcgggcaa
tgtgatgtctgcctcagcaaccgtgccagcaacgacttatctgagaaatcttatgaggaa
ttgaaaaggcaaatactggagttgcttggtcaaagtccactaactcctgccgaaattgcc
gataagataaaagcggaaaaagaagatatcgggcaagtaatccgatatttattagacgaa
gacggactgaagatgcaggacggaatgctacatatttcaaaataa
DBGET
integrated database retrieval system
