Bacteroides faecis: K6V30_10615
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Entry
K6V30_10615 CDS
T07899
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bfe
Bacteroides faecis
Pathway
bfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V30_10615 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfe03019
]
K6V30_10615 (rny)
Messenger RNA biogenesis [BR:
bfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
K6V30_10615 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
KH-I_KHDC4-BBP
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
UBE47219
LinkDB
All DBs
Position
complement(2789260..2790795)
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AA seq
511 aa
AA seq
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MIAIIATAIACFVVGGILSYVLFRYVLKSKYDSILKDAETEAEVIKKNKLLEVKEKFLNK
KADLEKEVALRNQKIQQAENKLKQREMVLSQRQEEIQRKKLEAEAVKENLEAQLVIVDKK
KEELDKLQHQEIEKLETISGLSADEAKERLVESLKEEAKTQAQSFINDIMDDAKLTASKE
AKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDDT
PEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVSKVRKQVEEEIIETGKRTTID
LGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLHD
IGKVPDEEPELPHALLGMKLAEKYKEKPDICNAIGAHHDETEMTSLLAPIVQVCDAISGA
RPGARREIVEAYIKRLNDLEQLAMAYPGVTKTYAIQAGRELRVIVGADKIDDKQTESLSG
EIAKKIQDEMTYPGQVKITVIRETRAVSFAK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgatagcaataatagcaacagcaattgcttgcttcgtcgtaggaggaatcctttcatat
gtacttttccggtacgtactgaagtctaaatacgatagtattctgaaagatgcggaaact
gaagctgaagtaattaagaaaaacaaattgctggaagtaaaggagaaattcctgaacaag
aaagctgatttggaaaaagaagtggcactgcgtaatcaaaaaattcagcaggcggaaaat
aaactgaaacaacgcgaaatggtgcttagccagcgtcaggaggaaatccagcgcaagaaa
ctggaagccgaagctgtaaaggaaaacctggaagcacagcttgtgatcgttgataagaaa
aaagaagaactggacaaactgcaacatcaggaaatagaaaagctggaaacaatctccggt
ctgtctgccgatgaagcaaaagaacgcctggtcgaatcactgaaagaagaagctaaaacg
caggcacagtcatttatcaatgacatcatggatgatgcgaaactgactgccagcaaagaa
gcaaaacgtattgttatccagtctatccaacgggtagctaccgaaactgccatcgaaaac
tccgtgacagtattccatatcgaatcagacgaaatcaaaggacgtattatcggacgtgaa
ggacgcaatatccgtgcactggaagccgctaccggcgttgaaatcgttgtagacgatact
ccggaagcaatcgttctttctgcttttgacccggttcgccgtgaaattgcccgtctggct
cttcaccaactggtaacagacggacgtatccatccggcacgtatcgaggaagtcgtgtct
aaagtacgcaaacaggtcgaagaggaaattatcgaaaccggtaaacgtacgacaatcgac
cttggtatccatggtctgcatccggaactgatccgtattatcggtaagatgaaatatcgc
tcttcgtatggccaaaacttgttgcagcatgcccgcgaaacagccaacctttgtgctgtg
atggcatcggaactgggactgaacccgaagaaggcaaaacgtgcaggtctgctgcatgat
atcggtaaagtacccgatgaagaaccggaattgccacatgcattgctgggtatgaaactt
gccgagaagtacaaagaaaaaccggatatctgcaacgctatcggcgctcaccacgacgaa
acggaaatgaccagtttgctggctcctatcgtacaggtttgtgatgctatctccggtgca
cgtccgggcgcacgccgcgaaatcgtagaggcgtatatcaagcgtctgaatgaccttgaa
caattggccatggcttatccgggcgtaaccaagacttatgctattcaggcaggacgtgaa
ctccgcgtaattgtaggtgcggacaagatcgacgataaacagactgaaagcttgtccggt
gaaatcgccaagaagattcaggatgagatgacttatccgggacaggtgaagatcaccgtg
atccgtgaaacacgtgcggttagtttcgctaaataa
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