Bacteroides faecis: K6V30_16040
Help
Entry
K6V30_16040 CDS
T07899
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
bfe
Bacteroides faecis
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfe03009
]
K6V30_16040 (rimO)
Enzymes [BR:
bfe01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
K6V30_16040 (rimO)
Ribosome biogenesis [BR:
bfe03009
]
Prokaryotic type
ribosomal protein modification factors
K6V30_16040 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UBE43739
LinkDB
All DBs
Position
4122722..4124032
Genome browser
AA seq
436 aa
AA seq
DB search
MKRKRIDIITLGCSKNLVDSEQLMRQLEEAGYSVTHDTEKPEGEIAVINTCGFIGDAKEE
SINMILEFAERKEEGDLKKLFVMGCLSERYLQELAIEIPQVDKFYGKFNWKELLHDLGKT
YHEELYIERTLTTPKHYAYLKISEGCDRKCSYCAIPIITGHHISKPIEEILDEVRYLVSQ
GVKEFQVIAQELTYYGIDLYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPTDLFRVMR
ERDNVCKYMDIALQHISDNMLKLMRRQVGKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE
TEEDFEELKEFVRKARFDRMGAFAYSEEEGTYAAKQYEDSIPQEVKQARLDELMDIQQGI
SAELSAAKIGQQMKVIIDRIEGDYYIGRTEFDSPEVDPEVLISHSGEELEIGQFYRVEVT
DADDFDLYAKIMNKYE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaagagaatagatattattactttaggttgttccaaaaatttagtagactcg
gagcagttgatgcgtcagctggaagaagcaggatatagcgtaactcatgatactgaaaaa
ccggaaggggaaattgcggtgatcaacacctgcgggttcatcggcgacgcgaaagaagag
tctatcaacatgattctggaatttgcagaaagaaaagaagaaggcgatctgaagaaactt
tttgtaatgggttgtctttccgaacgttatctgcaagaactggctattgaaattccacag
gtggataagttctacggtaaattcaactggaaagaacttttgcatgacttgggaaaaaca
tatcatgaggaattatacattgagcgtactttgacgactcccaagcattatgcatatctg
aagatttcagaagggtgcgaccgcaaatgctcttattgtgctattcccattatcaccgga
catcatatatccaagccgatagaagaaattctggacgaggtacggtatctggtatcgcaa
ggagtaaaagagtttcaggtgattgctcaggaattgacatattacggaattgacctgtat
aaaaagcaaatgttgcccgaattgatcgaacgtatttcggaaataccgggcgtagaatgg
attcgtttgcattatgcgtatccggcacattttccaacggatttattccgtgtaatgcgt
gaacgtgataatgtctgcaaatatatggatattgccttgcagcacatcagcgataatatg
ctgaaattaatgcgccggcaagtaggcaaggaagatacctacaagttgattgagcaattc
cgtaaagaagtgccgggcattcatctgcgcaccacgctgatggtaggacatccgggagaa
acggaggaggactttgaagagctgaaagagtttgtgcgcaaagcgcgttttgacagaatg
ggagctttcgcctattctgaagaagaaggaacttatgccgccaaacaatatgaagactct
ataccacaggaggttaagcaagcccgactggatgaactgatggatatccagcaaggtatt
tcagcagaattgagcgcagcgaaaatcggtcagcagatgaaagtgatcatcgaccggatc
gagggagattattatatcggacgtacagagtttgattcaccggaggtagatccggaggtg
ttgatcagccattctggagaggaacttgaaatcgggcaattctatcgggtagaagtaacc
gacgcggacgattttgatttatatgcaaagataatgaacaagtatgaataa
DBGET
integrated database retrieval system
