Bacteroides faecis: K6V30_18880
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Entry
K6V30_18880 CDS
T07899
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
bfe
Bacteroides faecis
Pathway
bfe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K6V30_18880 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfe03400
]
K6V30_18880 (uvrA)
DNA repair and recombination proteins [BR:
bfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K6V30_18880 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K6V30_18880 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
RsgA_GTPase
nSTAND1
ATPase_2
AAA_22
DnaJ_CXXCXGXG
AAA_14
Viral_helicase1
T2SSE
AAA_33
AAA_18
cobW
AAA_23
Glutenin_hmw
Motif
Other DBs
NCBI-ProteinID:
UBE47690
LinkDB
All DBs
Position
complement(4814947..4817772)
Genome browser
AA seq
941 aa
AA seq
DB search
MQETEYINVYGARVHNLKDIDAEIPRNSLTVITGLSGSGKSSLAFDTIFAEGQRRYIETF
SAYARNFLGNLERPDVDKITGLSPVISIEQKTTNKNPRSTVGTTTEIYDYLRLLYARAGI
AYSYLSGEEMVKYTEEQILDLILKDYKGKKIYLLAPLVRSRKGHYKELFEQVRKKGYLYV
RIDGELREVTHGMKLDRYKNHDIEVVIDKLIVADKDDKRLKQSVATAMRQGDGLLMILDA
QTENIRHYSKRLMCPVTGLSYREPAPHNFSFNSPQGACPKCKGLGVVNQIDVDKVIPDRE
LSIYEGAIAPLGKYKNAMIFWQIGALLEKYEATLKTPMKELSDDAVEEILYGSDDRIKIK
SSLIGTSSDYFVTYEGVVKYIQMLQEKDASATAQKWAEQFARTTVCPECKGARLNKEALH
FRIHDKNINELANMDINELYDWLMNVDQFLSDKQKKIAAEILKEIRTRLRFLLDVGLDYL
ALNRSSVSLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNLRLIRSLKELRDMG
NSVIVVEHDKDMMLAADYVIDMGPKAGRLGGEVVFSGTPSEMLKTETMTSQYLNGKMKIE
IPVKRRKGNGKSIWLKGAKGNNLKNVDVEFPLGKLICVTGVSGSGKSTLINETLQPILSQ
KFYRSLQDPLEYESIEGLENIDKVVDVDQSPIGRTPRSNPATYTGVFSDIRNLFVSLPEA
KIRGYKPGRFSFNVSGGRCEACTGNGYKTIEMNFLPDVYVPCEVCHGKRYNRETLEVRFK
GKSIADVLDMTINRAVEFFENVPQILNKIKVLQDVGLGYIKLGQSSTTLSGGESQRVKLA
TELSKRDTGKTLYILDEPTTGLHFEDIRVLMGVLNKLVDKGNTVIVIEHNLDVIKMADYI
IDMGPEGGKGGGVLLSYGTPEEVAKSQKGYTPKFLREELGL
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaacagaatatattaatgtgtatggtgctcgtgtgcacaacttgaaagatatt
gatgctgaaattccccgtaacagtttgacagtgattaccggattgagtggtagtggtaaa
tcttctttggctttcgatacgatatttgccgagggacaacgccgttatatcgagactttt
tcggcctatgcccgcaacttcctggggaatctggaacgtccggatgtcgataaaataact
ggtttgagtccggttatttccattgaacaaaagacgacgaataaaaatccccgttccact
gtaggaacaacaacggagatatacgattatcttcgtctgctttatgcccgtgcaggtatt
gcctattcgtacttgtcgggtgaggagatggtgaaatatacggaggaacagattctggat
ctgattctgaaagattataaaggaaagaagatatacttgctcgcaccattggtccgctcg
cgtaaaggacattacaaagaacttttcgaacaggtacgcaagaaaggatatctctatgta
cggatagatggcgaactgcgtgaagtgacacatggtatgaagctcgaccgttacaaaaat
catgatattgaggttgtaatagataagctgattgtagctgataaagatgataaacggctg
aaacagagcgtggcaactgcgatgcgtcaaggtgatggcttattgatgattctcgatgcg
caaacagaaaatatccgccattacagcaagcgcctgatgtgtccggtcacaggattgtct
tatcgggaaccggctcctcacaacttctcgttcaactctccgcagggagcatgtccgaag
tgtaaaggattgggagtcgttaatcagatcgatgtcgacaaggtgattcccgaccgtgaa
ctttccatctatgaaggagccatagcgcctttgggaaaatacaagaatgcgatgattttc
tggcagattggtgctttgctggagaagtatgaggctactttaaaaactccgatgaaggaa
ttgtcagacgatgcggttgaagaaatcctgtatggttctgacgatcggattaagatcaaa
agttcgttgatagggacttcttccgattactttgtgacctacgagggagtcgtaaaatat
atccagatgcttcaggaaaaagatgcatctgctacagcgcagaagtgggcggaacagttt
gcacggaccactgtttgtccggaatgtaaaggtgcccggttgaataaagaagcattacac
ttccgtattcacgacaagaacatcaatgagctggcaaatatggacattaatgagctatat
gactggctgatgaatgtggaccagttcctgtctgacaaacagaagaaaatcgctgccgag
attctgaaagagattcgtacgcgtttgagattcctgctggatgtagggctggattatctg
gcgctgaatcgtagttcagtcagtctgtccggtggtgaaagccagcgtattcgtctcgct
acacagattggttcccaattggtgaatgtactttatattctggatgaacccagtatcgga
ttgcaccagcgtgacaatctgcgactgatccgttcgttgaaggagctccgtgatatgggg
aactctgttatagtagttgaacatgataaagatatgatgctggctgccgactatgtgatt
gatatgggaccgaaagcgggacgtctgggcggagaagtcgttttctccggaactccgtcg
gaaatgcttaaaaccgagacgatgacttcgcaatatctgaacggaaagatgaaaatagaa
attccggtcaagcggagaaaagggaatgggaagtctatctggctgaaaggagcgaaagga
aataatctgaagaatgtagatgttgaatttccgttaggtaagttgatttgtgtgacagga
gtatccggaagcggtaagtcgactttgattaatgagactttgcagccgattctttcacag
aaattctatcgttccttgcaggaccccttggaatacgagtctattgaaggactggaaaat
atagataaggtagtcgatgtggatcagtctccgataggacgtactcctcgctccaatccg
gctacctatacgggtgtattttcagatatccgtaatttgtttgtaagtcttccggaagcc
aagatccgcggttataaacccggtcgtttctctttcaatgtatcgggcggtcgttgtgaa
gcctgtacgggtaacggatacaagacgattgaaatgaacttcttgccggatgtgtatgta
ccttgtgaagtttgccatggcaaacgctataatcgtgaaacgctggaagtacgtttcaaa
ggaaagtccattgctgatgtgcttgatatgactatcaaccgtgctgtcgaattttttgag
aatgttccgcagattctgaataagataaaagtcttgcaggatgtcggtttgggctatatt
aaattaggacagtcatctaccaccctttccggtggagagagccagcgtgtgaaactagcg
acagaattgtccaaacgagataccggtaaaacactttacattcttgacgaaccgactacc
ggcctccatttcgaagatatccgtgtgttgatgggggtacttaataaattggtggataag
ggcaataccgttattgtaatcgaacataacttggacgttatcaagatggcggattatatc
atagacatggggcctgaaggtggtaagggcgggggagtactccttagctacggaacaccg
gaagaggttgcgaagagtcagaaaggttatactccgaagtttcttcgcgaggagttagga
ctttga
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