Bacteroides faecis: K6V30_23690
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Entry
K6V30_23690 CDS
T07899
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bfe
Bacteroides faecis
Pathway
bfe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K6V30_23690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfe03019
]
K6V30_23690
Enzymes [BR:
bfe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
K6V30_23690
Messenger RNA biogenesis [BR:
bfe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K6V30_23690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
ERCC3_RAD25_C
CMS1
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UBE45124
LinkDB
All DBs
Position
complement(5935291..5936415)
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AA seq
374 aa
AA seq
DB search
MTFKELNITEPILKAVEEKGYTVPTPIQEKAIPVALVKRDILGCAQTGTGKTASFAIPII
QHLHLNKGEGKRLGIKALILTPTRELALQISECIDDYSKYTRIRHGVIFGGVNQRPQVDM
LHKGIDILVATPGRLLDLMNQGHIRLDNIQYFVLDEADRMLDMGFIHDIKRILPKLPKEK
QTLFFSATMPDTIIALTNSLLKNPVKIYVTPKSSTVDSIKQLVYFVEKKEKSQLLISILQ
KSEDRSVLIFSRTKHNADKIVKILGKAGIGSQAIHGNKSQAARQSALGNFKSGKTRVMVA
TDIASRGIDINELPLVINYDLPDVPETYVHRIGRTGRAGNEGTALTFCSQEERKLINDIQ
KLTGKKLNRADIAI
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgacatttaaagaattaaatataaccgaacctattttaaaagcagttgaagaaaaagga
tatactgtgcctactcctatccaggaaaaagcgattcctgtagcattggtaaaaagagat
atattaggttgtgcgcaaactggaaccggaaaaaccgcttcttttgcaatacctataata
caacatttacatctcaataagggagagggcaagcgtttgggaattaaagctctgatttta
actcctacgcgagaactcgcattacaaataagtgaatgtattgacgattattcaaaatat
acacgtattcgtcacggagtcatttttggaggtgtaaatcaacgcccacaagtggatatg
ttgcataagggaatcgatatcctggttgctactccgggacgcctgctcgatttaatgaat
caagggcatatacgattggataatattcagtattttgttttggatgaagcagaccgtatg
cttgatatgggctttattcatgatattaagcggatattaccgaaacttccgaaggaaaag
cagactttatttttctcggctacgatgcctgatacaattattgcgctgactaattctttg
ttgaagaatccggtgaagatttatgtaacaccgaaatcatcaactgtagattctataaaa
cagctggtttactttgtggagaagaaagagaaaagtcagttgttgatttcaatcttgcaa
aaatcggaagatcggtcagtacttatattctcgcgtacaaagcacaatgctgataagatc
gttaaaatattgggtaaagcaggtattggcagccaggctattcatggaaataagagtcag
gcagcacgacagtctgcgttgggcaattttaagtcgggaaagacgcgggtgatggttgct
actgatatcgcttctcgaggaattgatattaatgagctgccgttggttatcaattatgat
cttcctgatgtacctgagacgtatgtgcatcgtatcggacgtacaggaagagctggaaat
gaaggaacagcacttacgttctgttctcaggaagaacgtaaattgattaatgacattcag
aagttgacaggcaagaaactaaatagggctgacattgcaatttaa
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