Bombus fervidus (golden northern bumble bee): 139986218
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Entry
139986218 CDS
T12025
Symbol
Rrp1
Name
(RefSeq) recombination repair protein 1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
bfer Bombus fervidus (golden northern bumble bee)
Pathway
bfer03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bfer00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
139986218 (Rrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfer03400
]
139986218 (Rrp1)
Enzymes [BR:
bfer01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
139986218 (Rrp1)
DNA repair and recombination proteins [BR:
bfer03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
139986218 (Rrp1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
DUF3156
Motif
Other DBs
NCBI-GeneID:
139986218
NCBI-ProteinID:
XP_071857481
LinkDB
All DBs
Position
4:11094804..11097666
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AA seq
357 aa
AA seq
DB search
MISRSFQTSFRIVPRFLCNNVINMPPKQTRAPKENSMGIKSEKKNKVKSEATKKRSKRST
DDNEEPTAKRFKTDKKSILNRIDTNLNEIDFGCSKLNAKGNKYNLKISSWNVSGIRAVIK
KNGAEYMLKEDADIIALQETKCDKNKLPEEVKLNGYHYYFLESKKPGYCGVALYTKEKPI
DIKYGLDNVEFDSEGRLITAEYSNFYLVNVYVPNAGQKLITLPKRLKWNEAFKAYVKNLD
EKKPVIICGDMNVAHQKIDLKNPDTNKKNAGFTQEERSGMTDFLDAGFVDTFRALYPDKE
GAYTFWSYFANARSKNIGWRLDYFLVSKQIKDNVCDNVIRDKVYGSDHCPIVLYINI
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgatatcgcgcagttttcaaacttccttcaggatcgtgccgcgatttctgtgtaacaac
gtaatcaacatgcctccaaaacaaactcgagctccaaaggaaaattctatgggaattaaa
agtgaaaaaaaaaataaagtaaaatcagaagcaacaaagaaaagatctaaacgtagtaca
gatgataacgaagaacctactgcaaagcgtttcaaaacagacaaaaaatcaattttgaat
agaatagatacaaatttaaatgaaattgattttggttgttcaaagttaaatgcaaaagga
aacaaatataatttaaaaatttccagttggaatgtttctggcataagagcggtcattaaa
aaaaatggagcagaatatatgttgaaagaagatgcagacataattgcattacaagagacc
aaatgtgataaaaataagttacctgaagaagttaaattaaatggatatcattattatttt
cttgagagtaaaaaacctggatattgtggtgttgcattatacacaaaagaaaaaccaatt
gatataaaatatggtttagataatgttgaatttgatagtgaagggagattaattactgca
gaatattcaaatttctacttagttaatgtttatgttcctaatgctggtcaaaaattaata
acattgccaaaaagattgaagtggaacgaagcttttaaagcttatgtaaagaatctggat
gaaaagaaacctgttattatttgtggtgatatgaatgttgctcaccaaaaaatagatctc
aaaaatccagacacgaataaaaaaaatgctggatttacacaggaggaacgaagtggtatg
acagatttcttagatgcaggatttgtggatacttttagagctttatatcctgataaggaa
ggtgcatacacattttggtcatattttgctaatgcacgtagtaaaaatataggatggaga
ctagactattttttggtgtcaaaacaaattaaggataatgtttgtgacaatgttataagg
gataaggtgtatgggagtgatcattgtcctattgtactttacattaacatatga
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