Bombus fervidus (golden northern bumble bee): 139989681
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Entry
139989681 CDS
T12025
Symbol
LOC139989681
Name
(RefSeq) uncharacterized protein isoform X1
KO
K19719
collagen type II alpha
Organism
bfer Bombus fervidus (golden northern bumble bee)
Pathway
bfer04512
ECM-receptor interaction
bfer04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
bfer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139989681 (LOC139989681)
04518 Integrin signaling
139989681 (LOC139989681)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
bfer00536
]
139989681 (LOC139989681)
Glycosaminoglycan binding proteins [BR:
bfer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139989681 (LOC139989681)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
139989681
NCBI-ProteinID:
XP_071864285
LinkDB
All DBs
Position
8:14141114..14153102
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AA seq
1508 aa
AA seq
DB search
MGPKALRLAAAFAVIQLLLPQVHSIRTKLRKQRSKPLQAQQAANGDYDYDYYEGYDDYDD
RNETTTTTAPSPPVTSSVNTASRGELPTETLQTFYRPGLSTDVPTQATIRTFSQVGILPN
EVQTTPEQNHASPTEIVPGESNVISAVAVPGPRGEPGRPGDMGRPGDAGFPGHPGSPGIP
GPPGPPGPIPDVSMYYQQLALSQANQDKGPTGAAAPLYGPEAYLQMQTGPIGPRGPSGPP
GPPGPQGFQGVRGEPGEPGTLGPPGAPGPRGLAGLPGKDGNTGEDGEPGPPGSVGPVGPR
GLPGMPGLPGVKGHRGFPGLDGAKGEQGVSGEKGSMGVPGPMGHVGPMGPAGPRGERGRE
GPPGPPGIRGVDGIAGPPGQPGTVGKPGSPGFPGSPGVKGDQGAQGPKGSQGIQGPRGET
GRPGQPGESGPQGPQGKDGIPGEKGSTGAPGLVGAPGFPGARGQPGIPGNPGVPGAKGMP
GLSGERGFKGDSGAKGDSGTPGPRGLPGPPGNEGKRGKRGMRGPIGTSGPAGERGAPGAP
GLPGPDGPMGPKGQSGDRGPIGPMGLRGANGDPGRPGSPGLQGTRGLMGRPGAPGKPGNP
GDRGIQGADGKPGEQGPAGLQGLPGPIGLPGEKGYPGEPGKAGEPGNPGPPGPRGDTGKE
GAPGPQGSPGPSGVDGERGPPGSPGPRGFQGFPGVTGTPGTPGKDGESGVQGPPGPPGIP
GNRGERGFPGERGTPGGPGLTGPRGEPGAQGLDGPPGLPGAKGDRGISGPPGLVGLPGLR
GATGESGPKGERGSSGQPGPEGPPGRIGERGPQGQIGSPGPPGEPAERGDPGLPGPPGEV
GAPGNPGERGPQGLQGLQGFPGPQGLIGLPGLKGDRGYPGLKGDQGNPGLAGSPGETGPQ
GLVGLTGAKGVRGEPGARGEPGIMGPPGVPGIVGATGPPGAIGPSGPPGLPGSKGNIGET
GRAGNPGPIGNPGSPGADGNKGESGSQGPPGTPGPQGPQGSPGERGLPGLPGPSGPIGAR
GIRGAPGESGVSGKPGPEGPPGPPGQVGPIGPHGPSGEIGAEGPSGKPGPPGIAGRPGDK
GPPGAVGQTGLPGSPGLPGPPGQAGAPGSTGERGPKGETGPQGVEGQQGLRGKPGPIGLE
GPKGDRGEEGQKGAKGHRGFTGLQGLPGPTGLPGEKGIPGLPGLPGKDGESGPRGSPGRD
GSPGPIGLTGNPGPKGPSGEEGRHGPPGPPGPPGPPGPPGELGLGYDAASLAALLGQGQT
KGPDPLVGDEPPRMFSQDMTEEERKELILKAYKQLKSSFQKFVKPDGGKSSPAKTCRDLY
TAYPDKLSGEYWIDPNEGDTRDAILVYCDAKKRATCLLPNPVRSPEINYITDQPETWLSE
IENGMKITYKADSNQIGFLQLLSRHAYQNIIYHCKNSIGYFDSERKTYRKGMKFLTWNDV
ELTPRGNQRLRYEMITDECRTYNGQWGKTVVSYETDKPVRLPIIDVALRDIGKPDQSFSI
EIGTVCYE
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atggggccgaaggcccttcggttagccgcggcgttcgccgtcatccaacttcttttgccg
caggttcattccatacggaccaaactcaggaaacaacggtccaagccgctgcaagctcaa
caagccgcgaatggtgattacgattacgactattacgagggttacgatgactacgatgat
agaaatgaaactacaactacaactgcgccatcaccacctgttacatctagcgtcaatact
gcaagcaggggtgaattaccgacagagacgttgcaaactttctacagacctggactgtct
acagatgtaccaacgcaagcgacaattcgaactttcagtcaagtcggtatattaccaaac
gaagtgcaaacaacaccagaacaaaatcatgcatcaccgacagagattgttcctggtgaa
agtaacgtgattagcgcggtcgctgttcctggacccaggggcgaacctggtcgacctgga
gatatgggtcgtccgggagatgctggatttccaggacatcctggatctccgggaattccg
ggacctccggggccaccagggcctatacctgacgtatcgatgtattatcaacaattagct
ttatctcaagcaaatcaagataaaggaccgacgggagcagcagcacctttgtatggtcca
gaagcctatttacaaatgcaaactggtcctatcggaccgcgtggtccatcaggtccgcct
ggaccacccggaccacagggttttcaaggagtacgaggagaacctggtgaacctggtact
ttgggtcctccaggagcgccaggtcccagaggattagctggtttaccgggaaaggatggt
aataccggtgaagatggagaacctggtcctccaggatcggttggtccagtcggaccaaga
ggtctaccagggatgcctggtcttcctggtgtaaaaggacaccgaggttttccagggtta
gatggtgcaaaaggagaacaaggtgtatctggtgagaaaggatccatgggcgtacctgga
ccgatgggacatgtaggcccgatgggccctgcaggtccacgtggtgaaagaggtagagaa
ggtcctcctggacctccgggaattagaggagtggatggtattgctggaccccctggtcaa
cctggtacggtaggtaaaccaggttctcctggatttccaggtagtccaggtgtaaaagga
gatcaaggagcacaaggaccaaaaggaagccaaggcatacaaggcccccgaggtgaaact
ggtcgtcctggtcaacctggtgaatcaggaccacaaggtccccagggaaaagatggaata
cctggagaaaagggaagtacaggagcacctggtttagttggtgctccaggtttccctgga
gctcgcggacaacctggaatacctggcaatcctggtgttccaggggcgaaaggcatgcct
ggactttcaggcgaaagaggattcaaaggtgatagtggagctaaaggtgattcaggaact
ccaggaccacgtggtttgcctggtcctcctgggaacgagggtaaacgaggaaaaagagga
atgcgcggaccaattggtacatccggccctgccggagaacgtggagcaccaggcgcacca
ggtcttccgggacctgatggccccatgggacccaaaggtcagtctggagatcgtggacca
attggaccgatggggctcagaggagctaacggagatcctggtcgcccaggatctcccggt
ttacagggtacacgtggtttaatgggtcgccctggtgctcccgggaaaccaggaaaccca
ggagatcgaggaattcaaggtgctgatggaaaaccaggtgaacaaggtccagctggatta
caaggtttacctggtccaataggtctcccaggagaaaaaggatatccgggtgaaccagga
aaagctggtgagccaggaaatcctggaccacctggtcctagaggtgatacgggaaaggaa
ggagcaccaggacctcaaggttcacctggaccatcaggagtagatggtgaacggggacct
ccaggatctccaggtcctagaggttttcagggttttccgggcgttactggtactccagga
acaccaggaaaagatggagaatcaggtgttcaaggaccacctggtccaccaggtattcct
ggaaatagaggtgaacgaggatttcctggtgaaagaggtacaccaggaggaccaggatta
acaggaccaagaggagaaccaggtgcacaaggattagatggacctcccggattacctgga
gcaaaaggagatcgaggaatttcaggaccacctggattagtaggattgcctggcttacga
ggagctacgggagagtcaggtccaaaaggagaaagaggatctagcggacaacctggccct
gaaggacctccaggacggattggagagcgtggaccacaaggtcaaattggctcaccggga
ccgccaggtgaaccagcagagcgaggcgatcctggattacctggacctccaggagaggta
ggtgctcctggcaacccaggagaaagaggaccccaaggattacaaggactgcaaggcttc
ccaggaccacaaggactcattggtttaccaggattaaagggtgaccgtggttatccaggt
ttaaaaggagatcaaggaaatcctggtctagctggtagcccaggtgaaactggaccacaa
ggtctagttggtttgacgggagctaaaggagtacgaggagaaccaggtgctagaggagag
cctggtattatgggaccaccaggagtaccaggaatcgttggtgcaacgggcccgccaggg
gcaataggaccatcaggaccgcctgggttaccaggtagtaaaggtaatatcggagaaaca
ggacgagccggaaatcctggacctattgggaatccaggttcacctggtgcagatggaaat
aaaggcgagagtggttctcaaggaccaccaggtactcctggtcctcaaggtcctcaaggc
tctcctggcgaaagaggattacctggtttaccaggcccgtctggaccaataggcgctaga
ggaatacgaggagcacctggtgaatctggtgtatctgggaaacctggaccagaaggtcca
cctggacctcctggacaagttgggcccattggaccacatggaccatcaggagaaattgga
gcagaagggcccagtggtaaacctggaccacctggaatagcaggtcgtcctggagataaa
ggaccaccgggagcggtaggacaaacgggattgcccggctctcctggtttacccggacca
cctggtcaagcaggtgctccaggatcaactggagaaagaggaccaaagggcgaaacagga
ccacaaggtgtagaaggacagcaaggacttagagggaaaccaggacctataggattggaa
ggtcctaaaggtgatcgcggagaagaaggccagaagggtgcaaaaggccatcgaggattt
actggtttacaaggtttacctgggcctactggtctaccaggggagaaaggaatacctgga
cttcctgggctacctgggaaagatggtgaatctggacctagaggtagtcctggacgagat
ggcagccctgggccaatcggattaactggcaatccaggaccaaaaggtccttcaggtgaa
gaaggtcgccatggaccaccaggtcctcctggtcctccagggcctccaggtccacccggt
gaacttggattaggatatgatgctgcttctttagctgcacttttaggacaaggtcaaact
aaaggaccagatccattagttggtgatgaaccacctagaatgtttagtcaagacatgaca
gaagaagaaagaaaagaacttattttgaaggcatataaacaattgaaatcatcattccag
aaatttgtaaaaccagatggtggaaaaagttcaccagccaaaacttgcagggacctttat
actgcttatccagataaactttctggagaatattggattgatcctaatgaaggtgataca
agagatgcaattttagtgtattgtgatgctaagaaacgtgcaacatgtttattgcctaat
cctgtacgttccccagaaattaactatatcactgatcaaccagaaacttggttaagcgaa
atagaaaatggaatgaagattacatataaagcagatagtaatcaaattggctttttgcaa
cttctatcgagacatgcataccaaaatataatatatcactgtaaaaatagcataggctat
tttgattctgagcgaaagacgtatagaaaaggtatgaaatttttaacctggaatgatgta
gaattaacaccacgtggaaatcaacgtctaagatatgaaatgataactgatgaatgtaga
acatataatggacaatggggtaaaacagtagtttcatatgaaactgataagcctgtaaga
ctacctataatagatgtggccttacgagatattggaaaaccagatcaaagcttttctatt
gaaatcggtactgtttgttatgaataa
DBGET
integrated database retrieval system
