Bombus fervidus (golden northern bumble bee): 139989729
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Entry
139989729 CDS
T12025
Symbol
Usp39
Name
(RefSeq) ubiquitin specific protease 39
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
bfer Bombus fervidus (golden northern bumble bee)
Pathway
bfer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139989729 (Usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfer03041
]
139989729 (Usp39)
Spliceosome [BR:
bfer03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
139989729 (Usp39)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
139989729
NCBI-ProteinID:
XP_071864370
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All DBs
Position
8:12210496..12212939
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AA seq
502 aa
AA seq
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MATSKSGNQQKRKLVIERNNLDEEIAKKAKIIKTNSEAPRLCPYLDTINRQFLDFDFEKL
CSVSLSKINVYACLVCGKYFQGRGTNTHAYTHSVAESHHVFLNLHTLKFYCLPDNYEIID
SSLDDIKYVLNPTFDKAQIAQLDKSDKLSRAIDGSLYSPGIVGMNNIKANDYCNVILQAL
SHVTPLRDFFLRESNYSHVKRPPGDSSYLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAV
VLWSKKRFQFTEQGDPIDFLSWFLNALHLALNGTKKRDSSIVYKTFLGHMRIYTRKIPPL
ELDESQRSELLHTVEYGETVTESPFLYLTCDLPPPPLFKDQFTENIIPQVNLYTLLNKFN
AVTEKEYKTYKENFMKRFEITELPPYLILYIKRFTKNTFFVEKNPTIVNFPVKNVDFGDI
LTPEVKQRHPFTTYDLVANIVHDGEPGQGTYRVHILHRATGQWYELQDLHVTQILPQMIT
LTEAYIQIYELKNDVYSENGNN
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaagtaaatcagggaatcaacaaaaaagaaaattagtaatagaacgaaataat
ttagatgaagaaattgccaaaaaagctaaaattataaaaacaaattcagaagctccacga
ttgtgcccttatttagatacaataaatcgccaatttttagactttgattttgaaaaacta
tgttcagtatcattgtcaaaaattaatgtatatgcttgtcttgtatgtggaaagtacttt
caaggtagaggtacaaacactcatgcatacacacatagcgtagctgaaagtcatcatgtt
tttttaaatctacatacattaaaattttattgtttacctgacaactatgaaataattgat
tcatcattggatgacataaaatatgttttaaatccaacatttgataaagcacaaattgca
caattagataaaagtgataaattatcaagagccatagatggatcgctatattctcctggt
attgtaggaatgaataatattaaagcaaatgactattgcaatgttattttacaagcactt
tctcatgttacacctttaagagattttttcttaagagaatctaattattctcatgtcaaa
aggccacctggagattcttcttatcttttagttcaacgatttggtgaattaatgagaaaa
ttatggaatccacgtaatttcaaagctcatgtcagtccacacgaaatgttacaagctgtt
gttttatggagtaaaaagagatttcaatttaccgaacagggtgatccaatcgattttctt
tcatggtttttaaatgccctccatttagcattaaatggtacaaaaaagcgtgattctagt
atagtgtataaaacgtttttgggtcatatgcggatatatacacgaaaaataccaccactt
gaattggatgaaagtcaaagaagtgaattacttcatacggtagaatatggcgaaactgta
acagaaagcccatttttatatttgacatgtgatctcccaccaccacctcttttcaaagac
caatttactgaaaatattattcctcaagtcaatttgtacacattattgaataaatttaat
gctgtaactgaaaaagagtacaaaacatataaagaaaattttatgaagagatttgaaata
acagaacttcctccttatctcatactttatattaaaaggtttacaaagaacacatttttt
gtagaaaaaaatcccaccatagttaatttcccggttaaaaatgtagattttggagatatt
ttaacacctgaagtaaaacaaagacatccatttacaacatatgatttagtagcaaatata
gttcacgatggtgaacctggtcaaggaacgtatagagttcacattttacatagagcaact
ggtcagtggtacgagttgcaggatttacatgtaactcaaattttgccacaaatgataaca
ttaactgaagcatatatacaaatttatgagctaaaaaacgatgtatattcggaaaatggc
aacaattaa
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