Bombus fervidus (golden northern bumble bee): 139993989
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Entry
139993989 CDS
T12025
Symbol
Prp6
Name
(RefSeq) pre-mRNA processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
bfer Bombus fervidus (golden northern bumble bee)
Pathway
bfer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139993989 (Prp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bfer03041
]
139993989 (Prp6)
Spliceosome [BR:
bfer03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139993989 (Prp6)
Complex C
U5 SnRNP specific factors
139993989 (Prp6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP6_TPR
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_17
TPR_16
HAT_Syf1_CNRKL1_N
CFAP70_TPR_C
Suf
TPR_2
HAT_PRP39_C
HAT_Syf1_CNRKL1_C
TPR_11
TPR_8
TPR_15
TPR_1
TPR_6
TPR_9
TPR_CcmH_CycH
FAT
Iml2-TPR_39
ARM_TT21_N
ANAPC3
NatA_aux_su
TPR_Psidin_N
TPR_MalT
ChAPs
ARM_TT21_5th
TPR_21
Wzy_C_2
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
139993989
NCBI-ProteinID:
XP_071872320
LinkDB
All DBs
Position
14:7116722..7120434
Genome browser
AA seq
931 aa
AA seq
DB search
MAGPSVSLSTRNKKHFLGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPT
KRTKKKEEEEEDEEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEKRK
EYREKRLREELERYRQERPKIQQQFSDLKRELVNVAEEEWKNVPEVGDARNRKQRNPRAE
KFTPLPDSVLARNLGGETSTSIDPSSGLASMMPGVATPGMLTPTGDLDLRKIGQARNTLM
NVKLNQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNHPPA
WIASARLEEVTGKVQAARNLIMKGCEVNPTSEDLWLEAARLQPPDTAKAVIAQSVRHIPT
SVRIWIKAADLETETKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVECCP
TSVDLWLALARLETYDNARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVEKIIDRAI
SSLSANGVEINREHWFKEAMEAEKAGAVHTCQVIVKAIIGFGVEEEDRKHTWMEDAETCA
QQGALECARAVYAYALSTFPSKKSIWLRAAYFEKTYGTRESLESLLQRAVAHCPKSEVLW
LMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKARAS
APTPRVMMKSAKLEWALNNLDAALLLLKEALEAFDDFPKLWLMKGQIEEQQGNLDKALET
YNQAIKKCPNSIPLWRLLAQLEHRKGQVTKARSVLEKARLKNPKNPELWLEAIRNELKTG
GVRDMANTLMAKALQECPTSGLLWAEAIFMEPRPQRKTKSVDALKKCEHDPHVLLAVSKL
FWCEHKISKCRDWFNRTVKIDPDLGDAWAYFYKFELLNGTEEQQEDVKKRCIAAEPHHGE
NWCKVSKNIANWCLNTDQILVLVAKDLPIPI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtccatcggtttcgttatcaacgagaaacaaaaaacattttttgggtgttccg
gcacctttaggatatgttgctggtgttggaagaggagctactggatttacaactagatct
gatatcggtccagctcgtgatgctaacgatgtttcggatgatagacatgctccaccaaca
aaaagaacaaagaaaaaagaagaagaagaagaagatgaagaggatttgaatgattctaat
tatgatgaattttctggatatggaggatctttgtttagtaaagatccatatgataaagat
gatgaagaagctgatgctatttatgaggcaattgacaaacgaatggatgaaaagcgtaaa
gaatacagagaaaaaagacttagagaagagttagaaaggtatcgtcaagaacgtcctaaa
atacaacaacagttttctgacttgaaaagggaattagtaaatgtagccgaggaagaatgg
aaaaatgttccagaagtcggtgacgctagaaatcgaaagcaacgaaatccacgggcggaa
aaatttacaccattaccggattccgtccttgcacgaaatttaggaggcgaaacatctacc
agtatagatccatcgagtggtttggcatcaatgatgcctggtgtagcaacacctggaatg
ttaacaccaacgggagacttagatttaagaaaaattggacaggctagaaatactttaatg
aatgtcaagttgaatcaagtttctgattctgtagaagggcaaactgttgttgatcctaag
ggttatctcacagatttgcaaagtatgataccaacatatggtggtgatatcaatgatatt
aagaaagctaggttattattaaaatctgtaagggagacaaatcctaatcatccaccagcg
tggatcgcttctgctcgtttagaggaagttaccgggaaagtgcaagctgcacggaattta
ataatgaaaggctgtgaagtgaatcctacgtcagaagatttatggttagaagcagctagg
ctgcagccaccagatacagctaaagctgtaattgctcaatctgtacggcacataccaacg
tctgttagaatttggataaaagcggcggatttagaaacagaaacaaaagcgaaaagaaga
gtatatcgcaaagcattagagcatattccaaattcagtgagattatggaaagctgcagtg
gaattagaagaaccagaagatgcacgaattttgctcagtcgagcagtcgaatgctgtcca
accagtgtagatctatggcttgctcttgctcgattggaaacttatgataatgctaggaaa
gttcttaacaaagcaagagaaaatattccaacagatagacaaatctggacaacagccgca
aaattggaagaagcgaacgggaataaacatatggtagagaaaattatcgatcgtgcgata
tcttctttgagtgcgaacggagtggaaattaatagagaacactggtttaaagaagctatg
gaggctgaaaaagctggagcagtacatacatgtcaagttattgttaaagcaattattggt
ttcggagtggaagaagaagacaggaaacatacatggatggaagacgcagaaacctgcgct
caacaaggggcactagaatgtgctagagcagtctacgcttatgcgttatcgacattccct
agtaagaaatctatttggttacgcgcagcttactttgaaaaaacttatggaacgcgagag
tctttagaatctttgcttcaaagagcagttgctcactgtccaaagagtgaagtactttgg
cttatgggcgcaaaatcaaagtggttggctggtgatgttccagcagcaagaggtatttta
tcacttgcgtttcaagcaaatccaaattcggaggagatttggttagcagccgtgaagcta
gaatcagaaaattctgaatacgaaagagctagacggttgctcgcgaaagcaagagcgtct
gcaccaactcctagagttatgatgaaaagcgcaaaattagaatgggctttaaataatctc
gacgcagccttactgcttctgaaagaagctctagaagcattcgatgatttcccgaaacta
tggctaatgaaaggacagatcgaagaacagcaaggaaacttggacaaagccttggaaaca
tacaatcaagctataaaaaaatgtcccaattctattccactatggcgtttattagcacaa
ttagagcacagaaagggtcaagttactaaagctaggtcagttctggagaaggctcgccta
aaaaatccgaagaacccagagttgtggttagaagctatcagaaatgaattaaaaactggt
ggtgttagagatatggcaaatacgcttatggcaaaagcacttcaagaatgtccaacgtct
ggtttactttgggcagaggcaatttttatggaacctcgaccacagaggaaaactaaaagc
gttgatgctttgaaaaagtgcgagcatgatccacacgtgcttcttgcagtatctaaatta
ttctggtgtgaacataaaatttcgaagtgtcgtgactggttcaatcgaacagtgaagata
gatccagatttgggagacgcgtgggcatatttctacaaatttgagcttctaaacggtaca
gaagagcaacaagaagatgtaaagaaaagatgcattgctgcagaaccccatcatggtgaa
aattggtgtaaagtatcaaagaatatagccaactggtgtttgaatactgatcaaatttta
gtattagttgcaaaagatttaccgattccaatataa
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