Bombus fervidus (golden northern bumble bee): 139995855
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Entry
139995855 CDS
T12025
Symbol
Col4a1
Name
(RefSeq) collagen type IV alpha 1 isoform X1
KO
K06237
collagen type IV alpha
Organism
bfer Bombus fervidus (golden northern bumble bee)
Pathway
bfer04382
Cornified envelope formation
bfer04512
ECM-receptor interaction
bfer04518
Integrin signaling
bfer04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bfer00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
139995855 (Col4a1)
04518 Integrin signaling
139995855 (Col4a1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
139995855 (Col4a1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
139995855 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfer04147
]
139995855 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
bfer00536
]
139995855 (Col4a1)
Exosome [BR:
bfer04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
139995855 (Col4a1)
Glycosaminoglycan binding proteins [BR:
bfer00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
139995855 (Col4a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
139995855
NCBI-ProteinID:
XP_071875841
LinkDB
All DBs
Position
16:complement(1747527..1773935)
Genome browser
AA seq
1948 aa
AA seq
DB search
MTRLGLRFVASAVFLAGIVGGQYNHTSWSYNPPPVVPLGRGDIGKPNSTDDDYNISPRWR
AFVTNNEDSEEDRRYLNNQGQGYQGQNYDDRYNRYPDGDEYNQRTDDSGGYQTNYGGLDQ
ESYNQGQDQASLDPYNQEAGDPYGRSGGYEDSYGRGEAGGEQRSRDSSGDGYDRNYGSRD
DYGRGDPYGQRGDPYGQRGYSSGQRGGYGAAGDSENYPSSYTVVPVPGYKPQRNCTGSAC
CVPKCFAEKGSRGPPGVMGPQGPKGQKGFPGTEGLLGPKGEKGDPGPQGLRGPKGDRGKM
GIPGFSGISGVPGVQGPPGAPGLPGRDGCNGTDGEPGHAGRPGDTGPRGYPGPRGPKGDK
GQSGFAGRFPVGQKGEPGIDGVRGPPGQPGLQGERGFPGPKGDRGPYGPPGLQGPRGEKG
NMGLAFEGPKGDKGQKGEQGPPGSPAVGGFLHPGEEIAGPQGDRGEKGDTGERGSDGQKG
EQGPIGDHGIPGTAGMKGEKGLPGAPGIRGRDGFSGPPGPPGRKGDRGYDGLDGLPGRPG
QKGEPGRDGSMGVPGLRGPPGPPGGGKGTPGPPGPKGPQGFPGPTGPRGADGYPGDPGPR
GPIGPPGGPGLAGIPGPEGLPGEKGAKGEPGITGFPGPTGPRGFDGPPGLAGSRGLPGEK
GASIMGPKGMDGAPGIDGEKGQKGERGYAGPRGVPGDVDGIPGAPGEPGLPGEPGTPGKN
GIPGFPGSPGEKGEIGGRCIDCMPGFPGIKGDRGFDGQPGLPGPRGPAGERGFPGEPGSD
GLPGPIGPPGPPGKDGIPGAAGPQGEPGTPAVVTENMLKVEKGDKGVRGPVGRDGPPGLP
GPPGEKGPMGFEGFPGPKGIAGDRGFPGQDGIPGRPCAPGRKGEPGLSVKGEHGEPGRRG
ETGAKGEPGPLGDKGEPGLCPIPDELIKGIKGDRGAPGEKGEPGPPGRDGLSGDKGLQGI
SGPPGPPGSIGAPGPVGPRGLPGPRGDKGNMGPMGFPGEPGREGPRGFPGAAGLKGAKGE
VGISVKGSPGLPGPPGEKGEKGLPGPPGKEGPDGLPGLPGFSGEKGDAGIPGIGGLPGAP
GEKGDTGPMGPPGPPGVAGIPGIDGNKGEPGLPGEAGKPGLPGFPGIKGDRGEPGIDGSK
GYPGRRGLPGLQGTPGIEGAPGLKGERGEKGAAGFPGLRGMEGKPGRPGLTGPKGDIGHP
GLPGLPGTIGFQGPKGDQGLPGLPGRKGEPGLVSEKGQKGEPGMPGIRGPVGPPGRDGID
GDKGERGLSCNCVDGLPGLKGEPGLPGRDGLPGPIGLKGDAGVRGFHGSQGDTGPMGPPG
EPGTPGIDGLPGEPGDIGPPGPPGFPGLDGDVGAPGHPGLNGGKGDRGLPGLVGEPGIRG
APGEKGDRGQPGPTVAIKGEKGEPGMPGLRGVAGEKGDRGEEGLAGYDGEKGDRGTPGPV
GNPGPPGLPGPKGEEGPRGPTGIAGLTIKGEKGLPGLPGKHGREGLPGRPGEKGERGLPG
LPGHKGDQGPYGPVGPQGEKGDMGLMGSPGLPGQDGAPGHRGLPGQIGPKGEKGVNCIPE
PGLPGQKGEPGYPGLPGTDGLPGEKGDRGWPGLEGPPGLDGEKGERGFPGPIGKMGAIGF
VGQKGDKGLDCLEPPMGPKGDRGYPGPTGPPGPPGEKGASGQPGFPGLHGTKGAPGLQGP
PGPVGLPGLQGPVGAPGLPGLQGPVGHPGEPGEPGLPCEAAPDYLTGILLVKHSQTDRVP
VCDAGHIQLWEGYSMLSTDGNERSHSQDLGHAGSCVRKFSTMPFLFCDTGNVCNYASRSD
RSYWLSTTKAIPMMPIEGTAIEEYISRCVVCEVPANVIAVHSQSLNIPDCPHGWTGLWIG
YSFVMHTGAGAQGGGQSLSSSGSCLEDFRTTPFIECNEEHCHYYSNEISFWMTTIEDRLQ
FQRPEKQTLKAGNLRSRISRCQVCIKNT
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtgttcctggccgggatagttggt
gggcaatataatcacacatcatggtcgtacaatcctccgcctgttgttccacttggacga
ggtgatattggaaaaccaaatagtacagacgacgattataatatttcaccacgatggaga
gcttttgttacgaacaacgaagattctgaggaagataggcggtacttaaataaccaaggc
caaggctaccaaggtcagaattacgatgatcggtacaacagatatcctgatggcgatgaa
tataatcagagaaccgatgattccggcggatatcaaactaattatggaggcttggatcaa
gaatcctacaaccagggtcaagatcaagcctcgttggatccctacaatcaagaagctggc
gatccttacggaagatctggaggatacgaagactcttacggaagaggagaagccggagga
gaacaaaggtccagagattcttctggcgatggctacgatagaaattatggatccagagac
gattatggacgcggagatccttacggacaacgcggagatccttacggacaacgcggatac
tcttcagggcaacgtggaggatatggcgcggccggggattcggaaaattatccgagcagt
tacacggttgtgccagttccaggatacaagccacaacgaaactgtaccggatcggcctgc
tgcgtgccaaaatgtttcgcggagaaaggttccagaggtccaccaggtgtaatggggcca
cagggacctaaaggtcaaaaaggatttcctggaacagaaggtcttttgggaccaaaggga
gaaaaaggtgaccctggtcctcaaggactacgcggtccgaaaggtgacagaggtaaaatg
ggtatacctggattttccggtataagtggtgttcctggagtacaaggtccgcccggagct
cctggtctacctggtcgtgatggttgcaatggaacagacggtgaacctggtcatgctggt
cgccctggagatacaggtcctcgtggttatccaggtcctcgagggcccaaaggagacaaa
ggtcaatcagggttcgctggtaggttccctgtaggtcaaaagggagaaccgggtatcgac
ggtgtcagaggacctccaggacaaccaggattacaaggagagcgtggatttcctggacct
aagggtgatcgtggtccttatggtccgcctggtctacaaggaccaagaggagaaaaggga
aacatgggtcttgcgttcgaaggtccgaaaggtgacaaaggtcagaagggagagcaagga
cctcctggatcgcctgcagtcggcggctttctacatccaggagaagaaatagcaggtcca
cagggagatcgtggtgaaaaaggagacacgggtgaaagagggtcggatggtcaaaaagga
gaacagggaccaattggtgatcatggtattcctggtactgcaggtatgaaaggagaaaaa
ggtcttccaggcgcaccaggtattcgtggacgggatggtttctctggacctccaggtcca
cctggacgcaaaggtgatcgaggttacgacggattagacggccttccaggtcgtcctgga
cagaaaggagagccaggtcgagatgggtctatgggtgttccaggcttacgaggaccacct
ggtccacctggaggtgggaaaggtacgccagggcctccagggccaaaaggacctcaaggt
tttccaggacccactggacctcgcggtgccgatggatatcccggagatccaggaccaaga
ggtcctattggaccaccaggaggacctggtttagcaggtattcctggtccagagggctta
ccaggagaaaaaggagcaaaaggagaacctggcatcacaggattccctggaccaacaggt
ccccgtggatttgatggtccgccaggtttagcaggttcacgagggctgccaggagagaaa
ggcgcgtcgattatgggacccaaaggaatggatggagcgcccggtatagatggcgagaaa
ggacaaaaaggagaacgcggttacgcaggaccgcgtggagttcctggcgacgtggatggc
attccaggagcgcccggagaacctggtttaccaggagaaccgggaacgccagggaaaaac
ggcattccaggatttccaggttcacctggtgagaagggagagataggagggcgttgtata
gattgtatgccgggattcccaggaatcaaaggtgatcgtggtttcgatggacaacctgga
cttcctggaccacgaggtccggctggagaacgaggattccccggagaacctggcagcgac
ggattacctggaccaattgggccaccagggcctccgggaaaagatggaattcctggtgca
gcaggtccacaaggagaacctggtactccagcagtggttacggaaaacatgcttaaagta
gaaaagggtgataaaggtgtgagaggtccggtaggaagagatggtccacctggtcttcct
ggtccgcctggagaaaaaggtccaatgggattcgaaggtttcccaggacccaagggtatt
gctggagatcgtggattccctggtcaagatggtattcctggaaggccatgtgctcctggt
cgaaaaggagaacctggtcttagtgtgaaaggagaacacggagaaccaggccgaagaggt
gaaacaggtgcaaagggcgaacctggtccattaggagataaaggagaacccggtctgtgt
ccaattccggatgaattaattaagggcattaaaggcgacagaggtgctcctggtgaaaaa
ggagagcctggtccacccggaagggatggattaagcggtgacaaaggtttacaaggtatt
tcgggcccacctggaccacccggatcaattggtgcacctgggccagttggaccaagagga
ttaccaggtcctcgtggtgacaagggtaatatgggaccaatgggtttccctggggaacct
ggtcgtgaaggacccagagggttcccaggcgctgcagggttgaaaggagcaaaaggtgaa
gttggtatctcggtcaagggtagtcctggattgccaggaccaccgggagaaaagggagag
aaaggtcttccaggaccaccagggaaagaaggtcctgatggtctgccgggtctgccagga
ttttccggagagaagggtgatgcaggtattccaggcataggtggtttgcctggtgcgcca
ggagaaaagggagatactggtccgatgggacctccaggcccgcctggtgttgctggaatt
cctggtatagacggaaataaaggtgaaccgggattgccgggcgaggctggcaaaccagga
cttccaggattcccaggtatcaaaggagatcgtggcgaaccgggtatcgatggatcgaaa
ggttacccaggaagacgtggtctacctggtttacaaggtacacctggtatagaaggtgca
cctggtttgaaaggagaacgaggtgaaaaaggcgccgctggtttccctggattacgtgga
atggaaggaaaacctggccgccctggattaactggaccgaaaggagatataggtcatcct
ggtctgcctggtcttcctggaactattggattccaaggacctaagggtgatcaaggttta
ccaggattgccaggacgcaaaggagaaccaggtctagtttctgagaaaggacagaaaggt
gaaccaggaatgccgggtatccgtggtcctgttggtcctcctggtagagatggtattgac
ggagacaagggagaacgtggattgtcgtgtaattgtgtagacggattgccaggtcttaag
ggagaacctggtctgccaggtcgcgatggtttaccaggacctatagggctaaagggtgac
gctggagtaagaggtttccatggttctcaaggagatacaggaccaatgggtccaccaggt
gaaccaggaacacctggaatcgacggattgccaggtgaaccaggtgacatcggtccacca
ggtccacctggtttccctggtttggatggtgatgtgggagctccaggacatcctggcctc
aatggtggcaaaggagaccgtggtttgccaggtcttgttggggaacctggtatccgtggt
gcgcctggagaaaaaggcgaccggggacaacctggaccgacagttgctatcaaaggtgaa
aaaggtgaaccaggtatgccaggattacgaggtgtagctggagagaaaggtgatcgtggt
gaggaaggtctagctggttatgatggcgaaaaaggagataggggcacaccaggtccagtt
ggaaacccaggtccacctggcctccctggacctaaaggtgaagaaggtccacgtggacct
acgggaattgccggactaactatcaagggtgagaagggtttaccaggtctgccaggaaag
cacggacgagaaggactaccaggacgaccaggagagaagggagaacgaggattacctggt
ttaccaggacataaaggagatcagggaccttatggccctgtcgggccacagggcgagaag
ggtgatatggggcttatgggttctcccggtttaccaggtcaagatggagctccaggtcat
agaggactcccgggtcaaataggtccaaaaggtgaaaaaggtgtgaattgtataccagaa
ccaggtctgccgggacaaaagggagaaccaggatacccaggacttcccggaactgatgga
ctccctggtgaaaaaggtgacagaggttggcccggtctagagggtccacctggtctggat
ggagagaaaggtgaaagaggattccctggtccaataggaaaaatgggtgctattgggttt
gttggtcagaagggtgacaagggtctcgactgcctcgaaccaccgatgggaccaaaagga
gaccgtggttaccctggaccgactggcccgccaggcccgccaggagagaaaggagcttca
ggtcagccaggattcccaggattgcacggaacgaaaggtgcaccaggacttcaaggacca
ccaggtccagttggattaccaggattgcaagggcctgttggtgctcctggtttgccaggt
cttcaaggacccgtgggtcatccgggtgaaccaggagaaccaggactaccatgcgaagct
gcacctgattaccttactggtatcttgctggtgaaacacagccaaactgacagggtgcct
gtttgtgatgcaggacatatccaactctgggaaggatacagtatgttatctacggatggc
aatgaaagatcgcactcacaagatttaggtcacgccggctcgtgcgtacgaaagttctcg
acgatgccgttcctcttctgcgacaccggcaacgtttgtaactatgcaagtcgtagcgat
cgttcttactggttgtcgaccactaaagcaattcccatgatgcctattgaggggacagcg
atagaggaatacatctccagatgcgtggtttgcgaggttccagcgaatgtgatagccgta
cacagccagtcattgaatattccagattgtccacacggatggaccggactttggatcgga
tacagttttgtcatgcatacgggtgccggtgcccagggtggaggacaatccttgtccagt
tccggatcctgtctcgaagatttccgtacaacgccatttatcgaatgtaacgaagaacac
tgccattattactcgaacgagatcagcttttggatgacgacgatagaggacaggcttcag
ttccaaaggcctgagaaacagaccttgaaggcaggcaacctcaggtcccgaataagtcgc
tgccaagtgtgtataaagaacacgtaa
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integrated database retrieval system
