Bombus fervidus (golden northern bumble bee): 139996115
Help
Entry
139996115 CDS
T12025
Symbol
Atg18a
Name
(RefSeq) autophagy-related 18a isoform X1
KO
K17908
autophagy-related protein 18
Organism
bfer Bombus fervidus (golden northern bumble bee)
Pathway
bfer04136
Autophagy - other
bfer04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
bfer00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
139996115 (Atg18a)
04136 Autophagy - other
139996115 (Atg18a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bfer04131
]
139996115 (Atg18a)
03029 Mitochondrial biogenesis [BR:
bfer03029
]
139996115 (Atg18a)
Membrane trafficking [BR:
bfer04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
139996115 (Atg18a)
Mitochondrial biogenesis [BR:
bfer03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
139996115 (Atg18a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_Prp19
BCAS3_WD40
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_Gbeta
DUF7165
Beta-prop_HPS5
Beta-prop_NOL10_N
VID27
Beta-prop_VPS8
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_Aladin
Ge1_WD40
Beta-prop_Vps41
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
139996115
NCBI-ProteinID:
XP_071876329
LinkDB
All DBs
Position
17:731130..742947
Genome browser
AA seq
470 aa
AA seq
DB search
MQNLVHNVDVLTQGLKYSISGLMNLANQTTDPQSRVFFVNFNQDCTSLAVGSKAGYKLFS
LSSVDHLEKIYENDTEDIYIVERLFSSSLVAVVSLRSPRKLKVCHFRKGTEICHYSYSNT
ILAVKLNRARLVVCLEESLYIHNIRDMKVLHTIRDTPPNLAGLCTLSINSDNCYLAYPGS
NTIGEVQIFDAINLQAKTMIPAHDSPLAALAFSPNGTKVATASEKGTVIRVFHVHDGTKL
FEFRRGVKRCVSISSLAFSVDSMFLCCSSNTETVHIFKLEEPKEALRQTTEESQTWMGYL
TKAVSASANYLPSQVTDVFNQGRAFASVHLPFQGLKNVCAITVVHKVLRLLVASAEGYLY
VYNLDSTEGGDCTLLKQHRLDGKRDEVDCASASTAGSTEPPSGTNTARIVQNTACINSYA
GVLRGRSPDSMSESEKYHEMIAATESPPGFSGSFRLKDDAEFPPVTQRTD
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatctcgtgcataacgtggatgtattgacacaaggattaaaatacagtatatca
ggactaatgaacctcgcaaatcagactactgatcctcaaagtcgtgttttctttgttaac
ttcaatcaggattgcacatctttggcagtaggatcaaaggcaggctacaaacttttttct
ttaagctctgttgaccatcttgagaaaatatatgaaaatgatactgaagacatatatatt
gttgaacgactattcagcagcagtcttgtggcggtagttagtttaagatcgcctcgtaaa
ctcaaagtttgtcactttaggaagggcactgaaatttgccactatagttattctaatact
attttggctgtgaaattgaatagggcaagattagtggtatgtctggaagaatcattatat
attcataacataagagacatgaaagtgctacacacaattcgtgatactccacctaattta
gcaggtctgtgtacactatcaataaatagtgataattgctatttagcttatccaggttca
aacacaattggtgaagttcaaatatttgatgcaattaatcttcaagctaaaactatgatt
cctgcgcatgacagcccattggcagcacttgcatttagccctaatggtaccaaagtagct
actgcttccgaaaagggtactgtaattagagttttccatgttcatgatggtacaaaactg
tttgagtttcgtcgtggagttaagcgatgcgtatctataagcagtcttgcttttagtgtg
gactctatgtttctttgttgttcaagtaatacagaaacagtgcatattttcaagttggaa
gaaccaaaggaagcattgcggcaaacaacagaagaatcacaaacttggatgggatactta
acaaaggctgtatctgcatcagctaattatttaccatcacaagtaactgatgttttcaat
caaggacgtgcctttgctagcgtccatttgccatttcaaggattaaaaaatgtttgtgcc
atcacagtcgtacataaagtacttaggttgttggtggctagtgctgagggttatttgtat
gtttataatttggactcaactgaaggtggagattgtacattgcttaaacaacatagacta
gacggtaaacgagatgaagtggattgtgctagtgcgtctacagcaggatctacagaacct
ccttcaggaacgaatactgcacgaatagtacaaaatacagcctgcataaatagctacgcg
ggtgtgttgcgcggccgctcgccagactccatgtcagagtcagaaaagtatcacgagatg
atagcagcaactgagagtccaccaggcttttcgggttccttccgtttgaaagatgatgct
gaatttccacctgttacgcaaaggacggattga
DBGET
integrated database retrieval system
