Bombus fervidus (golden northern bumble bee): 139998119
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Entry
139998119 CDS
T12025
Symbol
LOC139998119
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
bfer Bombus fervidus (golden northern bumble bee)
Pathway
bfer03018
RNA degradation
bfer03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bfer00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139998119 (LOC139998119)
09123 Folding, sorting and degradation
03018 RNA degradation
139998119 (LOC139998119)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfer03019
]
139998119 (LOC139998119)
03041 Spliceosome [BR:
bfer03041
]
139998119 (LOC139998119)
Messenger RNA biogenesis [BR:
bfer03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139998119 (LOC139998119)
mRNA degradation factors
5'-3' decay
Lsm complex
139998119 (LOC139998119)
Spliceosome [BR:
bfer03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
139998119 (LOC139998119)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LSM12_LSM
Motif
Other DBs
NCBI-GeneID:
139998119
NCBI-ProteinID:
XP_071878537
LinkDB
All DBs
Position
2:complement(5203959..5204662)
Genome browser
AA seq
91 aa
AA seq
DB search
MTSSVSTNPSTLLPLELVDKCIGSRIHIIMKNDKEIVGTLLGFDDFVNMLLEDVTESEAT
PEGRRVTKLDQILLNGSNITMLVPGGEMPDT
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgacgagttctgtcagtacaaatccatcaacattattgcctttagaattagttgacaaa
tgtatcggttctcggatacatattattatgaaaaacgataaagaaattgtcggtaccttg
ttaggttttgatgattttgtaaatatgctgctcgaagacgtgacagaaagcgaagcaaca
cccgagggacgaagagtcaccaagcttgatcaaatactgcttaacggaagcaatatcaca
atgcttgtacctggtggagaaatgcctgacacgtaa
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