Borreliella finlandensis: QIA19_02745
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Entry
QIA19_02745 CDS
T09223
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bff
Borreliella finlandensis
Pathway
bff02020
Two-component system
bff02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bff00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QIA19_02745 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QIA19_02745 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bff03021
]
QIA19_02745 (rpoN)
Transcription machinery [BR:
bff03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QIA19_02745 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
MarR
HTH_36
HTH_11
Motif
Other DBs
NCBI-ProteinID:
WKC89954
LinkDB
All DBs
Position
460305..461564
Genome browser
AA seq
419 aa
AA seq
DB search
MIKQKLKISQNLNSIQIQTIKILGLNQKELTKLILEEIENNECLKIDSNKIFFETLKTYR
FKKVFYKEDDMIKNQHDIALEKTQTNISLKEHLLLQLRIQRINEDEIKIGEILINNLNSK
GFHIINPYDLFKKEEKEKVKKIIELIQKFDPIGICVPNIIESLILQAKHHKLETNIIKIL
EKAELLEKTQEKLKEELKIRSKEFNKALEIIRQKLNPNPTLEFKDPDDTNFYVDPDILII
NHNNKFKIKIKEVNIFKKELKRTSENPQKQKKAKWLIESLRYRDEILAKIGIAIYTLQKE
FLRRGFKSLRPMNLSILSEKISVSKSTISRAIKNKYLKCKWGTILIKELFSSVGGAKTNE
FSKLSIKITVKKLLEANKKMSDKAISVILKSKGISISRRTVNKYRNELKSEKGRTYYGT
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaaaaattaaaaatatctcaaaatttaaactcaattcaaatacaaacaata
aaaatattaggccttaatcaaaaagaattaacaaagcttatactagaagaaatcgaaaat
aatgaatgcctaaaaatagactcaaataaaatattttttgaaacattgaaaacatatagg
tttaaaaaagttttttataaagaagatgatatgataaaaaatcaacacgacatagctctt
gaaaaaacacaaacaaatatttctttaaaagaacaccttttactgcaactaagaattcaa
agaataaatgaagatgaaattaaaataggcgaaatactaataaacaatctaaacagcaaa
ggttttcatataataaacccttacgatctttttaaaaaggaagaaaaagaaaaagtaaaa
aaaataattgaacttattcaaaaatttgatccaattggaatttgtgtccccaacataata
gaatcgttaattttgcaagcaaagcatcataaattagaaactaatattattaaaattctt
gaaaaagcagagcttcttgaaaaaactcaagaaaagttaaaagaagagcttaaaataaga
agcaaagaatttaacaaagctttagaaattatcagacaaaaacttaaccccaacccaaca
cttgaatttaaagacccagacgacactaatttttatgttgatccagatatattaataata
aatcacaataataaatttaaaattaaaatcaaagaagttaatatctttaaaaaagaactt
aaaaggacaagtgaaaatccccaaaaacaaaaaaaagcaaagtggttaatcgaatcccta
cgatacagagacgaaatacttgcaaaaatagggatagctatatatacattgcaaaaagaa
tttctaagaagaggatttaaaagcttaaggccaatgaacttgagcattttatcagaaaaa
attagtgtatcaaaatcaacaatatcaagagcaataaaaaataaatacttaaaatgcaaa
tggggtacaatattaatcaaagagctttttagctctgttggtggagcaaaaacaaatgaa
ttttcaaaattaagcatcaaaataacagtaaaaaagttgttagaagcaaataaaaagatg
tcagacaaagcgatttctgttatactgaaatccaaaggaatctctatttctagaagaaca
gtaaacaagtacagaaatgaattgaaatctgaaaaagggagaacatattatggaacctaa
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