Bacteroides fragilis 638R: BF638R_0023
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Entry
BF638R_0023 CDS
T01691
Symbol
pdhD
Name
(GenBank) putative dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg00010
Glycolysis / Gluconeogenesis
bfg00020
Citrate cycle (TCA cycle)
bfg00260
Glycine, serine and threonine metabolism
bfg00280
Valine, leucine and isoleucine degradation
bfg00310
Lysine degradation
bfg00380
Tryptophan metabolism
bfg00620
Pyruvate metabolism
bfg00630
Glyoxylate and dicarboxylate metabolism
bfg00640
Propanoate metabolism
bfg00670
One carbon pool by folate
bfg00785
Lipoic acid metabolism
bfg01100
Metabolic pathways
bfg01110
Biosynthesis of secondary metabolites
bfg01120
Microbial metabolism in diverse environments
bfg01200
Carbon metabolism
bfg01210
2-Oxocarboxylic acid metabolism
bfg01240
Biosynthesis of cofactors
Module
bfg_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bfg_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bfg_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
bfg_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BF638R_0023 (pdhD)
00020 Citrate cycle (TCA cycle)
BF638R_0023 (pdhD)
00620 Pyruvate metabolism
BF638R_0023 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
BF638R_0023 (pdhD)
00640 Propanoate metabolism
BF638R_0023 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BF638R_0023 (pdhD)
00280 Valine, leucine and isoleucine degradation
BF638R_0023 (pdhD)
00310 Lysine degradation
BF638R_0023 (pdhD)
00380 Tryptophan metabolism
BF638R_0023 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BF638R_0023 (pdhD)
00670 One carbon pool by folate
BF638R_0023 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bfg04147
]
BF638R_0023 (pdhD)
Enzymes [BR:
bfg01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
BF638R_0023 (pdhD)
Exosome [BR:
bfg04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
BF638R_0023 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
NAD_binding_8
DAO
HI0933_like
FAD_binding_3
FAD_oxidored
GIDA
AlaDh_PNT_C
FAD_binding_2
Thi4
Trp_halogenase
3HCDH_N
Lycopene_cycl
2-Hacid_dh_C
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
CBW20639
UniProt:
E1WJR8
LinkDB
All DBs
Position
27844..29187
Genome browser
AA seq
447 aa
AA seq
DB search
MKYQVIIIGGGPAGYTAAEAAGKAGLSVLLFEKQNLGGVCLNEGCIPTKTLLYSAKTYDG
AKHASKYAVTVPEVSFDLPKIIARKSKVVRKLVLGVKSKLTSNNVTIISGEATILDKNTV
RCGEETYECDNLILCTGSETFIPPIPGIDSVNYWTHREALDNKELPASLAIVGGGVIGME
FASFFNSLGVKVTVIEMMDEILGGMDKELSALLRADYAKRGIQFLLSTKVVSLAQTEEGA
VVSYENAEGAGSVIAEKLLMSVGRRPVTKGFGLENLNLQRTERGSIVVNGQMESSLPGVY
VCGDLTGFSLLAHTAVREAEVAVHAILGKEDRMSYAAIPGVVYTNPEIAGVGQTEESLTA
KGIAYRAVKLPMAYSGRFVAENEGVNGVCKVLLGEDDTILGAHVLGNPASEIITLAGMAV
EMKLKAAEWKKIVFPHPTVAEIFREAL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgaaataccaggttattattatcggtggagggcctgccggctatacggctgctgaggct
gccgggaaagcaggactgagtgtgttgctttttgagaaacaaaatttaggaggtgtctgt
ctgaacgaagggtgtatcccgacaaaaacgttactctattcggctaaaacctatgatggt
gctaaacatgcgtcaaaatatgctgtaacggttccagaggtctcttttgatcttcctaag
atcattgctcgtaaatcgaaggtggtacgtaaactggttttaggggtaaaatcgaagtta
acgtccaataatgttactattataagtggagaggcaaccattttggacaagaatacggtt
cgttgcggtgaagaaacttatgaatgtgataacttaattctctgtacaggttccgaaact
tttattcctcctattcccggaatcgatagtgtaaactattggacacatcgtgaagcatta
gacaataaggagttgccggcttcacttgccattgtgggcggtggagtgatcggtatggag
tttgcgtcctttttcaatagtctgggtgtgaaggtgaccgttattgagatgatggatgaa
attctgggaggcatggataaagagctttccgccctgttgcgtgccgactatgcaaagcgg
ggcattcagttcctgttaagtaccaaagtcgtttcattggcacagacggaagaaggtgct
gtggtttcttatgaaaacgccgaaggggcaggaagcgtgattgccgaaaagctattaatg
agtgtgggacgtcgtccggtgacaaaaggctttgggcttgagaaccttaacctgcaacgg
acagaacgtggaagtattgtagtgaacgggcaaatggaaagctcgttacccggagtctat
gtttgcggtgatttaaccggattctccttattggcacatactgctgtccgtgaagcagaa
gtagccgtacatgcaattcttggaaaagaagataggatgagttatgccgctatccccggg
gtagtttatactaatcctgaaatagccggtgtcgggcagacagaagaatctctgactgca
aaaggcattgcttaccgtgccgtaaaacttcccatggcatattccggacgttttgttgct
gagaatgaaggagtgaatggagtatgtaaggtgctacttggcgaggatgatactattttg
ggagcacatgttttgggtaatcctgcttctgagattatcacgttggcagggatggctgta
gaaatgaaactgaaggcagccgagtggaagaagattgttttcccacatcctacggttgcc
gagattttccgtgaagcattataa
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