Bacteroides fragilis 638R: BF638R_0055
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Entry
BF638R_0055 CDS
T01691
Name
(GenBank) putative tRNA pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bfg
Bacteroides fragilis 638R
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfg03016
]
BF638R_0055
Enzymes [BR:
bfg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BF638R_0055
Transfer RNA biogenesis [BR:
bfg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BF638R_0055
Prokaryotic type
BF638R_0055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CBW20668
UniProt:
E1WJU7
LinkDB
All DBs
Position
57162..57863
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AA seq
233 aa
AA seq
DB search
MNFKEGEVLYFNKPLGWTSFKVVGHARYHMCRRMKVKKLKVGHAGTLDPLATGVMIVCTG
KATKRIEEFQYHTKEYVATIQLGATTPSYDLEHEIDATYPTEHITRELVEKTLKTFVGEI
QQIPPAFSACKVDGARAYDLARKGQEVELKPKLLVIDEIELLECNLPEIKIRVVCSKGTY
IRALARDIGEALQSGAHLTGLIRTRVGDVKLEQCLDPAKFAEWIDQQDVEISD
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaagaaggagaagtactttattttaataaaccgttgggatggacgtctttt
aaagtcgtggggcacgcccgttaccatatgtgccggcggatgaaagtgaagaaattaaag
gttggacatgcaggtacactcgatcccttggcaacaggggtgatgattgtttgtacaggc
aaggctaccaagagaatagaggagtttcagtatcatacgaaggagtatgtggctaccata
cagttgggcgctactactccgtcttacgatctggaacatgaaatagatgctacataccct
acggagcatattacccgtgagttggtggaaaagacgttgaaaacgtttgttggcgagata
cagcagatacctcccgctttctcggcttgtaaggtagatggtgcacgcgcttacgatttg
gcccgtaaaggccaggaagtggagttgaaaccgaaattgctggtgattgatgagatagag
ttgttggagtgtaatttaccggaaattaaaatacgggtggtttgcagcaaggggacttac
attcgtgcattggcacgtgacatcggagaggctttgcaaagcggggcgcacttgaccggg
ctgatacgtacccgtgtgggagacgtcaagttagagcagtgtctggatccggcaaagttc
gcggaatggatagatcagcaagatgttgagatatctgattga
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