Bacteroides fragilis 638R: BF638R_0308
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Entry
BF638R_0308 CDS
T01691
Symbol
murD
Name
(GenBank) putative UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg00470
D-Amino acid metabolism
bfg00550
Peptidoglycan biosynthesis
bfg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BF638R_0308 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BF638R_0308 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bfg01011
]
BF638R_0308 (murD)
Enzymes [BR:
bfg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
BF638R_0308 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
bfg01011
]
Precursor biosynthesis
Amino acid ligase
BF638R_0308 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
MurD_N
CC_BshC
DUF7876
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
CBW20909
UniProt:
E1WM66
LinkDB
All DBs
Position
complement(332974..334308)
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AA seq
444 aa
AA seq
DB search
MKRIVVLGAGESGAGAAVLAKVKGFDTFVSDMSAIKDKYKTLLDGHGIAWEEGRHTEEQI
LSADEVVKSPGIPNDAPLILKLREQGTPIISEIEFAGRYTDAKMICITGSNGKTTTTSLI
YHIFKSAGLNVGLAGNIGKSLALQVAEEKHDYYVIELSSFQLDNMYNFRADIAVLMNITP
DHLDRYDHCMQNYINAKFRITQNQTSEDAFIFWNDDPIIKRELDKHGIRAHLYPFSAIKE
EGSIAYVEDHEVVITEPIAFNMEQEQLALTGQHNLYNSLAAGISANLAGITKEDIRKALS
DFQGVEHRLEKVARVRGIDFINDSKATNVNSCWYALQSMTTKTVLILGGKDKGNDYTEIE
ELVREKCSALVYLGLHNEKLHEFFDRLGLPVAEVQTGMKDAVEAAYKLAKKGETVLLSPC
CASFDLFKSYEDRGEQFKKYVREL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaattgtagtattaggagccggtgaaagcggtgcgggagcagccgttctggcc
aaagtaaaaggattcgatactttcgtatcggatatgtctgctatcaaggataagtataaa
actctccttgacggccatggcattgcctgggaagaaggccgacacacagaagaacagatt
ttgagtgctgacgaagttgtgaaaagccccggaattcctaatgacgccccactgattctg
aaattgagagaacagggcacacctatcatctcggaaatagaatttgccggcagatacacc
gatgccaaaatgatctgtatcaccggctcgaacggaaagacgaccacaacctcgcttatc
tatcacatttttaaaagcgcaggactaaatgtgggacttgccggaaacatcggtaaaagc
ctggcattgcaagtggccgaagagaaacatgattattatgtaatcgaattgagttcattc
cagttggataacatgtataacttccgtgccgatatcgctgtattgatgaacattacaccg
gaccatctggaccggtacgaccattgtatgcagaactatattaacgcaaagtttcgtatt
acgcagaatcagacttcggaagacgcgtttatcttctggaacgatgaccctatcatcaaa
cgtgaactggacaaacatggcattcgtgcccacctgtatccattctcggcaatcaaagaa
gaaggatctatcgcctatgtggaagaccatgaagtagtaattaccgaaccgatcgctttc
aatatggaacaggaacagttggccctgaccggccaacacaatctttataactctttagcc
gccggtatctccgccaaccttgccggtatcaccaaagaagatataaggaaagcgctcagt
gactttcagggggtagaacaccgcctggagaaggtggcacgcgtacgtggcattgatttt
atcaatgactccaaagcaacgaatgtaaactcttgctggtatgccttgcagagtatgact
actaaaacggtattgattctcggaggaaaagacaagggaaacgattatacggaaatagaa
gaactggtacgggagaaatgctcggcactggtctacctgggattgcacaacgaaaagctt
catgagtttttcgaccgtctcggactccctgtagccgaagtacagaccggcatgaaggat
gccgtagaagcagcttacaagctggcgaaaaagggagaaacagtattgttgagtccatgt
tgcgcctcctttgaccttttcaagagctatgaagaccgtggcgaacagtttaagaagtat
gtaagagaattataa
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