Bacteroides fragilis 638R: BF638R_0551
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Entry
BF638R_0551 CDS
T01691
Name
(GenBank) putative ECF-type RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF638R_0551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfg03021
]
BF638R_0551
Transcription machinery [BR:
bfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF638R_0551
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
MOLO1
DUF8427
HTH_24
CDI_Immunity_Comp
HTH_10
HTH_40
KORA
Ssl1
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
CBW21142
LinkDB
All DBs
Position
complement(641499..642059)
Genome browser
AA seq
186 aa
AA seq
DB search
MDDLNINSFNALYTLYYRKSFLFAKSYVHDEQVAEDIAAEALIKLWEKLKTDIINSPQAM
LLTILKNKSLDYLRLEQNKLNAMSELSELYVRELDIRVSSLEACDPSEIFSEEVNQIIQA
TLRTLPEQTRRVFKMSRFENKMNKEIAENLGITVKGVEYHISRALKEFRISLKDYLPLFY
FFFYFH
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggacgacttaaatatcaacagttttaacgctctctatactctttattacaggaagtct
ttcttgtttgccaaatcgtatgtacacgacgaacaggtagcagaagacattgcggccgaa
gcactgatcaaattgtgggaaaaactgaaaactgatatcataaattcccctcaggccatg
ttactcaccattctgaaaaataaatcactggattacttacgtctggaacaaaacaaactg
aatgccatgtccgagttgagtgaactttatgttcgcgaactggacattcgtgtatccagc
ctggaagcttgtgacccgtcagagattttttccgaagaagttaaccaaattatccaagcc
accctacgcacactcccggaacaaacccgaagagtctttaaaatgagtcgtttcgagaat
aaaatgaataaggaaatagctgaaaatctgggcatcacagtcaaaggagtggaatatcac
atatcaagggcgcttaaagaattccggatttcactcaaagattatcttcccttgttttac
ttctttttctatttccactaa
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