Bacteroides fragilis 638R: BF638R_0582
Help
Entry
BF638R_0582 CDS
T01691
Symbol
rpoE
Name
(GenBank) putative RNA polymerase ECF sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF638R_0582 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfg03021
]
BF638R_0582 (rpoE)
Transcription machinery [BR:
bfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF638R_0582 (rpoE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
GerE
Sigma70_r4
HTH_24
HTH_23
HTH_11
HTH_40
HTH_5
HTH_10
PF0610-like_N
Sigma70_r3
HTH_38
HTH_20
HTH_ParB
DUF2316
PEHE
MarR_2
HTH_29
SAM_DprA
HTH_17
HTH_AsnC-type
Xre-like-HTH
PhoU_div
HTH_16
HTH_69
HTH_DeoR
MarR
HTH_3
Terminase_5
Glyco_hydro_5_C
Motif
Other DBs
NCBI-ProteinID:
CBW21171
LinkDB
All DBs
Position
683650..684213
Genome browser
AA seq
187 aa
AA seq
DB search
MHSEIAEEKLLVSQFSQGSHIAFKALFMRYYPKVRSFIMGLVKSESEAEDLTQEVFLKLW
THREKFCEVEVFGTYLYVLTKNTTFNYLRSRQNRQDSQGTEWVEESTDTTPYEELVAKDL
QLLIDMVVENMPPQRQMIFRLNREAGLTNAEIAEKLQISKKTVENHLNLALKELKNALLF
FIFLYLC
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgcattctgaaatcgcagaagaaaaattactggtctcccaattctcccaaggaagccat
atagcgtttaaggcattgtttatgcgttattatccgaaggtgcgctcttttataatggga
ttggttaaatcggagagtgaagccgaagatttgacacaagaagtttttctcaaactgtgg
acgcaccgtgagaaattttgtgaagtagaagtgttcggaacctatctgtatgtcttgact
aaaaatacaactttcaattatttgcgttcccggcagaatcgtcaggatagtcaggggaca
gaatgggtagaagagtctacagacacgactccttatgaagagttggttgctaaagacttg
cagctattgattgatatggtggtggagaatatgcctcctcaacggcaaatgatttttcgg
ttgaatcgggaggccggactgaccaatgcagaaatagcggagaagctgcagattagtaaa
aaaactgttgagaaccatcttaacttagcgttgaaagaactgaaaaatgctttgttattc
tttatatttctctatttatgttaa
DBGET
integrated database retrieval system
