Bacteroides fragilis 638R: BF638R_0614
Help
Entry
BF638R_0614 CDS
T01691
Symbol
rpoE
Name
(GenBank) putative RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF638R_0614 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfg03021
]
BF638R_0614 (rpoE)
Transcription machinery [BR:
bfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF638R_0614 (rpoE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
GMT-wHTH
HTH_24
DUF722
HTH_23
RasGEF_N
HTH_16
PhyR_sigma2
Motif
Other DBs
NCBI-ProteinID:
CBW21202
LinkDB
All DBs
Position
731427..732014
Genome browser
AA seq
195 aa
AA seq
DB search
MNQFLDFDQKLYAELRKGSEHAFVTVFERYNRLLYALAYRYFKSGEEAEDAVQYTFMKLW
EQRSSFEFQSGIRSLLFTILKNYIMNELRHRQIVFEKHYEMAQRNEEADDSFLKNFEDKD
FREHLRTAIGKLPPQKQKICRLKIEKGLSNQEIADEMHITVPTVKSHYTQAIKILRAEIE
SLIVLLHVLWIHFLE
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaatttttagattttgaccagaaactgtatgctgaactccgtaaaggcagcgag
cacgcttttgttactgttttcgaacggtataaccgcttgttgtatgcgctggcttatcgg
tattttaaatcaggtgaagaggctgaagacgcagtgcaatatacttttatgaaattgtgg
gagcaacgttccagttttgaatttcaatctggcatcagaagcctgttgttcaccatcctg
aaaaactacattatgaacgagttgagacatcggcagattgtctttgaaaagcattacgag
atggctcaacggaacgaagaagcggacgacagttttctgaagaattttgaagataaagat
ttcagggaacatcttcggactgccatcggtaaactacctcctcaaaaacagaaaatatgc
cgcctgaaaatagaaaaaggactttctaaccaggaaatagcggacgagatgcatatcacg
gtgcctaccgtaaagtcccattatactcaggccattaagatactccgtgcggagattgaa
tcgttaattgtattacttcatgtattgtggattcattttttagagtga
DBGET
integrated database retrieval system
