Bacteroides fragilis 638R: BF638R_1032
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Entry
BF638R_1032 CDS
T01691
Name
(GenBank) putative RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF638R_1032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfg03021
]
BF638R_1032
Transcription machinery [BR:
bfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF638R_1032
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_30
Sigma70_r2
HTH_AsnC-type
HTH_24
HTH_10
HTH_38
HTH_11
HTH_23
HTH_28
GerE
HTH_40
HTH_8
DUF7646
HTH_20
PCI
HTH_3
HTH_5
Transposase_mut
TetR_N
HTH_17
Raftlin
MazG-like
HTH_Mga
HTH_DeoR
MerR
Xre-like-HTH
DUF134
Trp_repressor
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
CBW21597
LinkDB
All DBs
Position
complement(1263315..1263917)
Genome browser
AA seq
200 aa
AA seq
DB search
MPKTKVYMYNDTSRTVSDETLFFQVQQGNEGAFEALFLRHYPALCAYARLFVEPDDGQEI
VSDVMVWLWENKEMQAFENSLKSYLFKAVKNRCLTLINRNEVKQRIEKMIFDNLQSQYDD
PDFYAIQELTEKIEEALARLPENVCEAFELNRFQNLTYNEIAERLGVSPKTIDYRIQQAL
KQLRIDLKEYLPLLLPFLLH
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
ttgcccaaaacgaaggtctacatgtataacgacacctcgcgcacagtaagcgatgaaact
ctgttcttccaggttcagcagggaaacgaaggcgcattcgaagcattgtttctcaggcat
tacccggctctttgtgcctatgcccggctctttgtcgaaccggatgacggccaggagatc
gtatcggacgtcatggtctggctttgggaaaataaagaaatgcaggcattcgagaattcc
ttaaaaagttatttgttcaaggctgttaaaaaccgctgcctgactctcatcaaccggaac
gaagtgaaacaacggatcgaaaaaatgatattcgataatctccaatcgcagtatgatgat
cccgacttctacgctatacaggagttaaccgaaaaaatagaagaagctctggcacgactt
cccgagaatgtatgcgaagcattcgaactcaaccgctttcagaatctgacatacaatgaa
atagccgaacgactgggagtgtctcccaaaacaatcgattaccggattcaacaggcctta
aaacagttgcgcatcgacctgaaggagtatctccccttattacttcctttcctcttgcat
tga
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