Bacteroides fragilis 638R: BF638R_1411
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Entry
BF638R_1411 CDS
T01691
Symbol
trmU
Name
(GenBank) putative tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
BF638R_1411 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bfg03016
]
BF638R_1411 (trmU)
Enzymes [BR:
bfg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
BF638R_1411 (trmU)
Transfer RNA biogenesis [BR:
bfg03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
BF638R_1411 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
PAPS_reduct
Asn_synthase
NAD_synthase
QueC
DUF3562
ThiI
DUF7411
Arginosuc_synth
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
CBW21950
UniProt:
E1WSL6
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All DBs
Position
1665420..1666481
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AA seq
353 aa
AA seq
DB search
MDIAALLSGGVDSSVVVHLLCEQGYKPTLFYIKIGMDGAEYMDCSAEEDIELCTAIARRY
GLALEVVDLHREYWDNVAAYAIEKIRKGQTPNPDVMCNKLIKFGCFEQQVGKDFDLTATG
HYATTLQLGGKTWLGTAKDPIKDQTDFLAQIDYLQVSKLLFPIGGLMKHEVREIALQAGL
PSARRKDSQGICFLGKINYNDFVRRFLGEKEGAVIEFETGKKIGTHRGYWFHTIGQRKGL
GLGGGPWFVVKKDIQDNIIYVSHGYDAEQQYGYEFRMKDFNFITDNPWEGSTGEEEVTFK
IRHTPEFIKGRLLHDEEGYRIISSEKLQGIAPGQFGVIYDAESRVCFGSGEIG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggatatagcagcattattatcgggaggagtggacagttcggttgttgtacatctgctt
tgtgagcagggctacaagcctacactgttttacatcaaaataggtatggatggggcggaa
tacatggactgttctgccgaagaggatatagaactgtgtactgccatagcccgacgctac
ggtttggcactggaggttgtcgatttacatcgggaatactgggataatgtggctgcttat
gccatagaaaagatacggaaggggcagactccgaatccggatgtgatgtgtaacaagctg
attaagtttggctgtttcgagcagcaggtcggaaaagatttcgatcttacggcaaccgga
cattatgctacgaccttgcaactaggcgggaaaacctggctgggtacagccaaggacccg
ataaaagatcagactgatttcctggcccagattgactatttgcaggtttcgaaattgttg
tttccgataggtgggctgatgaagcatgaagtgcgtgagatagcgttgcaggccggattg
cccagtgcccgtcggaaggatagtcagggaatttgctttttgggcaagataaattataac
gattttgtccgtcgctttctgggagaaaaagagggggcggtgatcgaatttgaaacaggt
aagaagattggtactcatcgcggctattggtttcataccattggccagcgaaaaggattg
ggattgggaggaggaccctggttcgttgtgaagaaggatattcaggataacattatttac
gtctcccatggttatgatgccgagcagcagtatggttatgaattcaggatgaaagacttc
aattttattacagataacccgtgggaaggctcgacaggcgaggaggaagtaacatttaag
atccggcatacacctgagtttatcaaaggccgtttgctacatgacgaagagggataccgg
attatttcttccgaaaaattacagggaattgcaccgggacagtttggcgtgatttatgac
gccgaatcccgggtttgtttcgggagtggagaaataggataa
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