Bacteroides fragilis 638R: BF638R_2543
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Entry
BF638R_2543 CDS
T01691
Name
(GenBank) putative helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg03420
Nucleotide excision repair
bfg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BF638R_2543
03430 Mismatch repair
BF638R_2543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfg03400
]
BF638R_2543
Enzymes [BR:
bfg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BF638R_2543
DNA repair and recombination proteins [BR:
bfg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BF638R_2543
MMR (mismatch excision repair)
Other MMR factors
BF638R_2543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
ResIII
PhoH
Motif
Other DBs
NCBI-ProteinID:
CBW23050
UniProt:
E1WP95
LinkDB
All DBs
Position
complement(2997159..2999519)
Genome browser
AA seq
786 aa
AA seq
DB search
MPDYIEELNESQRAAVLYGDGPSLVIAGAGSGKTRVLTYKIAYLLENGYNPWNILALTFT
NKAAREMKERIARQVGEQRARFLWMGTFHSVFSRILRAEASHIGFTSQFTIYDSADSKSL
IRSIIKEMGLDEKTYKPGSVQARISNAKNHLVSPSGYAANKEAYEGDLAAKMPAIRDIYS
RYWERCRQAGAMDFDDLLVYTYILFRDFPDVLARYREQFRYVLVDEYQDTNYAQHSIVLQ
LTKENQRVCVVGDDAQSIYSFRGADIDNILYFTKIYPDTKVFKLEQNYRSTQTIVRAANS
LIEKNERQIPKEVFSEKERGEAIGVFQAYSDVEEGDIVTNKIAQLRREHDYEYSDFAILY
RTNAQSRVFEEALRKRGMPYKIYGGLSFYQRKEIKDIIAYFRLVVNPNDEEAFKRIINYP
ARGIGDTTVGKIITAATDNNVSLWTALCEPITYGLSINKGTHTKLQDFRALIEQFMADVT
VKNAYEIGTEIIRQSGIINEVCQDNSPENLSRKENIEELVNGMNDFCAMRQEEGNTNVSL
IDFLSEVSLLTDQDSDKEGDGEKVTLMTVHSAKGLEFRNVFVVGMEENLFPSGMAGDSPR
AMEEERRLFYVAITRAEEHCFLSFAKTRFRYGKMEFGSPSRFLRDIDTRFLQLPQEAALG
RSIDEGAGRFRREMEEGYSRRSSSERFSARPSADRPERERPKAQIIAPTVPRNLKKVSGT
TLSPSSASGAGVAGVQPGQTIEHERFGLGEVIRVEGTGDNAKATIHFRNAGDKQLLLRFA
RFKVIE
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgcccgactatatcgaagaacttaatgaaagccagcgtgcggcggtgctctacggtgat
ggcccttcgctggtcatcgccggtgccggttccggaaagacgcgtgtgctcacttataag
atagcctatctgctcgagaacggttacaatccctggaatatcctggcactgactttcacc
aacaaagctgcccgtgaaatgaaggagcgtattgcccggcaggtgggcgagcagcgtgca
cgattcctttggatgggtacgttccattcggttttttcccgtattcttcgtgccgaggcg
tcccatatcggctttacgtcccagttcaccatctacgattcggcggacagcaagagcctg
attcgttccatcatcaaagagatggggcttgacgagaagacctataagcccggcagtgtg
caggcacgcatctccaatgcgaagaaccacctggtgtctccttcgggatacgcagccaac
aaggaggcgtacgagggcgatcttgccgcaaagatgcctgccatacgggatatctacagc
cgctactgggagcgttgccggcaggccggagcaatggatttcgacgatctgctggtctat
acctatatccttttccgcgactttcccgacgtgctggcacgctatcgcgagcagttccgc
tatgtgcttgtcgacgagtatcaggacaccaactatgcacagcacagcatcgtgctgcaa
ctgacaaaggagaatcagcgtgtatgcgtggtgggcgacgacgcgcagagcatctactcc
ttcaggggagcggacattgacaatattttgtatttcaccaagatatatcccgataccaaa
gtcttcaagctggagcagaactaccgttccacccagaccattgtccgtgcggccaacagc
ctgatcgaaaagaacgagcggcagatccccaaagaggtgttctccgagaaggaacggggt
gaggccatcggggtctttcaggcttacagtgatgtggaagaaggcgacattgtgaccaat
aaaatagcgcaactgcgtcgcgagcacgattatgaatactctgacttcgccatcctttat
cgtaccaatgcccagagccgtgtcttcgaagaggctttgcgcaaacggggcatgccttat
aagatttacggcggcctctctttctatcagcgcaaggagatcaaagatatcatagcctac
ttccgcctggtggtcaaccccaatgacgaagaggcgttcaagcggattatcaattatccg
gcacgcggcatcggcgataccacggtgggcaagattattactgccgccaccgataacaat
gtcagcctctggaccgcactctgcgaacccattacgtacgggctttccatcaataaaggc
acacataccaaattgcaggattttcgtgcgctgatcgagcagtttatggcagatgtgacc
gtaaagaatgcttatgaaataggtacggagatcatccgtcagtccggcatcatcaatgaa
gtctgccaggacaattcgcccgaaaatctcagccggaaagaaaacatcgaggaactggtg
aacggtatgaatgatttttgtgccatgcgtcaggaagaggggaacacgaacgtttctctg
atcgactttctctccgaagtatccctgctcaccgatcaggattccgacaaggagggagac
ggcgagaaggtgactctgatgacggtacattccgccaaaggactggagttccgcaacgta
ttcgtggtggggatggaagagaatcttttccccagcgggatggcgggcgattcaccccgt
gcgatggaagaggagcgacgcttgttctatgtagccatcacccgtgccgaagagcactgt
ttcctctcgtttgccaaaacccgtttccgttacggtaagatggagttcggcagccccagc
cgtttcttgcgggacatcgacacccgtttcctgcaacttccgcaggaggccgctttaggc
cggagcatcgacgaaggggccggccgcttccgccgcgagatggaagaggggtattcgcgc
cgttcgtcttccgagcgcttctctgcccgtccgtcggccgaccgtccggaacgcgaacgg
ccgaaggcgcagatcatcgcgccgacggtcccccgtaacttgaaaaaggtaagtgggact
acgctctccccatcgtcggcttccggagccggcgtcgccggcgtacagcccggacagacc
atcgagcacgaacgcttcggcctgggtgaggtgatccgcgtagaaggtacgggcgacaac
gccaaagctaccattcatttccgtaatgcaggcgataaacagctgttgctgcgtttcgcc
agatttaaagtaatagaataa
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