Bacteroides fragilis 638R: BF638R_3866
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Entry
BF638R_3866 CDS
T01691
Name
(GenBank) putative ribosomal large subunit pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
bfg
Bacteroides fragilis 638R
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bfg03009
]
BF638R_3866
Enzymes [BR:
bfg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
BF638R_3866
Ribosome biogenesis [BR:
bfg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BF638R_3866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
CBW24314
UniProt:
E1WND8
LinkDB
All DBs
Position
complement(4551528..4552928)
Genome browser
AA seq
466 aa
AA seq
DB search
MSTENEEWREDSKSENTDAGRDGNRSFNREGGYSRPSYNREGGDRPYRPRFNSNSEDRPQ
RSYGDRPQRPSYNREGGDRPYRPRFNSEGGDRPQRSYGDRPQRPSYNREGGDRPYRPRFN
SEGGDRPQRSYGDRPQRPSYNREGGDRPYRPRFNSEGGDRPQRSYGDRPQRPSYNREGGD
RPYRPRYNNDNRSQGFSRPIRRTGDYDPNAKYSKKKQIEYKEQFVDPNEPIRLNKFLANA
GVCSRREADEFITAGVVSVNGEVVTELGTKIKRADVVKFHDETVSIERKVYVLLNKPKDC
VTTSDDPQARLTVMDLVKGACAERIYPVGRLDRNTTGVLLLTNDGDLASKLTHPKYLKKK
IYHVYLDKNLTKADMDQIAAGIQLEDGEIHADAISYSDEVKRDQVGIEIHSGKNRIVRRI
FESLGYKVVKLDRVFFAGLTKKGLRRGEWRYLTEQEVNFLRMGSFE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagaaaacgaagaatggcgcgaagactccaagagtgagaatacggacgccggc
cgtgatggtaacagaagttttaacagagaaggcggatacagtcgtccttcatacaatcgt
gaaggtggcgaccgtccttatcgtccgagatttaatagtaatagtgaagatcgtcctcag
cgttcttatggtgatcgtccgcaacgtccttcatataatcgtgaaggtggcgaccgtccc
tatcgtccgcgttttaacagcgagggtggtgaccgtcctcagcgttcctatggcgaccgt
ccgcaacgtccttcatataatcgtgaaggtggtgaccgtccctatcgtccgcgttttaac
agcgaaggtggtgaccgtcctcagcgttcttatggcgaccgtccgcaacgtccttcatat
aaccgtgaaggtggcgaccgtccctaccgtccgcgctttaacagcgaaggtggtgatcgt
cctcagcgttcctatggcgaccgtccgcaacgtccttcatacaatcgtgaaggcggtgac
cgtccctatcgtccgagatacaataacgataacagatcgcagggattctcacgtccgata
cgtcgtacgggggattacgatccgaatgctaaatacagtaagaaaaaacagattgaatac
aaagaacaatttgttgatccgaatgaaccgatccgtctgaataagttcctggctaatgca
ggagtctgctctcgtcgtgaagctgatgaatttatcacggcaggtgtagtttctgtcaat
ggagaggttgttacagagttgggtacaaagatcaagcgcgctgatgtggtgaagtttcac
gatgaaaccgttagtattgagcgtaaggtgtatgtgttgctgaacaagccgaaagattgt
gtaactacttcagatgatcctcaggctcgtctgactgttatggatctggtaaaaggggcc
tgcgctgagcgtatttatccggtaggacgtctggaccgtaacacaacaggggtattgctg
ttgactaatgatggtgatttagcttctaaactgacacatccgaaatacctgaagaaaaaa
atctatcatgtatatttggataagaatctgactaaggcagatatggaccagattgcagcc
ggtattcagctggaagatggtgaaatccatgcggatgccatcagttattctgacgaggtg
aaacgtgatcaagtgggtatcgaaatccactccggaaagaatcgtatcgtccgtcgtata
tttgaatcgttgggttacaaggtggtgaaacttgaccgtgtattctttgccggactgact
aaaaaaggattgcgccgtggtgagtggcgttatcttacagaacaggaagttaacttcctc
cggatgggatcttttgaataa
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