Bacteroides fragilis 638R: BF638R_3952
Help
Entry
BF638R_3952 CDS
T01691
Symbol
mrdA
Name
(GenBank) putative penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg00550
Peptidoglycan biosynthesis
bfg01100
Metabolic pathways
bfg01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BF638R_3952 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BF638R_3952 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bfg01011
]
BF638R_3952 (mrdA)
Enzymes [BR:
bfg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
BF638R_3952 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
bfg01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
BF638R_3952 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
CBW24397
UniProt:
E1WNU8
LinkDB
All DBs
Position
complement(4658496..4660352)
Genome browser
AA seq
618 aa
AA seq
DB search
MAKDYVLEKRKYVIGGVALAIVLIYLLRLFSLQIATDDYKKNADSNAFLNKIQYPSRGAM
YDRNDKLLVFNQPAYDITMVPKEVENLDTLDLCQTLNITRAQFLKIMSDMKDRRRNPGYS
RYTNQVFMSQLSAEECGVFQEKLFKFRGFYIQRRTIRQYSYNSAAHVLGDIGEVSMKDIE
NDDYYIRGDYIGKQGIEKSYESYLRGEKGVEVLLRDAHGRIQGHYMDGKYDKRPIPGKNL
KLGIDIDLQMLGERLLKNKIGSIVAIEPETGEILCMVSSPDFDPRLMIGRQRGKNHLMLQ
RDPMKPLLNRSIMGVYPPGSTFKTAQALTFLQEGIIQTNTPAFPCAHGFNYGSLHVGCHA
HGSPLPLIPAIATSCNSYFCWGLFRMFGDRKYGSSQNAITVWKDHMVSQGFGYKLGVDLP
GEKRGLIPNAQFYDKAYRGRWNGVTVISIAIGQGEILATPLQIANLGATIANRGHFITPH
IVKEIQDEQLDSLYRVPRKTSIDRKHYEDVVTGMRAAVTGGTCRVAGAILPDVEVCGKTG
TAQNRGHDHSVFMGFAPMNNPKIAIAVYVENGGFGAVYGVPIGALMMEQYLKGKLSPENE
IRAEEYSNRVIMYGNEER
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagattatgttttagagaaacggaaatatgtgatcggcggagtagcattggct
attgtcctgatttacctgctgcgtctgttttctctccagatagctactgatgactataaa
aaaaatgccgacagtaatgctttcctgaataagattcagtacccgtcacgtggggcaatg
tacgaccggaatgataaactgttagtgtttaatcagcctgcgtatgatataacaatggtg
ccgaaggaagttgagaacctcgatacactcgacttgtgccagacgctgaatatcactcgt
gcacagtttctgaagataatgagtgatatgaaagatcgtcgcaggaatcccggttattca
cgctataccaatcaggtattcatgtctcaactttcggcagaagaatgtggcgtatttcag
gagaagttatttaagtttcgcggattctatatccagcgacgtaccattcgtcaatatagc
tataactccgctgcccatgtgcttggtgatattggtgaagtatcaatgaaagacatcgaa
aatgatgattattacatccggggagactatatcgggaaacagggtattgaaaaatcatat
gaatcttatttacggggcgaaaagggcgttgaggtattgttgagggatgcgcacggacgt
atacaaggacattatatggatggaaagtatgataagcgtccgatacccggaaagaacctg
aagctcggaatcgatatcgatctccagatgttgggagaacgcttgttgaaaaataaaatc
gggagtattgttgctatcgaaccggagacgggagaaatactttgcatggtttcttcaccc
gattttgatccgagactgatgattggccgtcagcgcggaaagaaccatttgatgctccag
agagatccgatgaaacctttgttaaaccgttcgattatgggagtatatcctccgggatcg
acgtttaaaacggcacaagcgctgactttcttacaagaagggattattcagaccaatacg
ccggctttcccttgtgctcatgggttcaattacgggagtttgcatgtgggatgtcatgcc
catggttcgccgttgccgctaataccggccattgcgacttcatgtaactcttatttttgt
tggggcttgttccggatgtttggcgatcgcaagtatggctcctcacaaaatgccattact
gtatggaaagaccacatggtgtctcagggttttggctataaactcggggtggatttaccg
ggtgaaaagcgggggttgattcctaatgctcagttttatgacaaggcctatcgtggacgt
tggaatggggtgacggtgatcagtatcgcaattggccagggagagattctggcaactcct
ttgcagatagccaatttgggtgcgacaatagccaatcggggacattttattactccacat
attgtgaaggaaattcaagatgaacagctcgacagcctctatcgggttcccagaaaaacc
tctatcgaccggaagcactatgaagatgtggttacaggcatgcgtgctgcggtcacagga
ggtacttgccgggtagcaggagccattttaccggacgttgaagtatgtggcaaaaccggt
acggcgcagaaccgaggacatgaccactccgtttttatgggatttgctcccatgaataac
ccaaagatagccatcgccgtatatgttgagaatggtggttttggcgcagtctacggagta
ccgatcggagcattgatgatggaacaatatttaaaagggaaactctctccggagaatgag
atacgtgcagaagaatatagtaatagagtgattatgtatggaaacgaggagcgttag
DBGET
integrated database retrieval system
