Bacteroides fragilis 638R: BF638R_4147
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Entry
BF638R_4147 CDS
T01691
Name
(GenBank) putative ECF-type RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
bfg
Bacteroides fragilis 638R
Pathway
bfg02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BF638R_4147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bfg03021
]
BF638R_4147
Transcription machinery [BR:
bfg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BF638R_4147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
TnsD
HTH_24
Mycobacteriophage_Gp53
HTH_40
DUF7645
HTH_23
LIN14_BEN
Motif
Other DBs
NCBI-ProteinID:
CBW24578
LinkDB
All DBs
Position
complement(4878942..4879490)
Genome browser
AA seq
182 aa
AA seq
DB search
MVDFEQFYITWYSRAKYFAREYVHSESDAENIIQDVFLHLYERRDLMDAYTNLTAYLFTS
IKNRCLDYLRKWVLEQETAQGVQDEFDMELRIKYDSLEIFNTQFSDETDIGELLDNALQK
LPERCRNIFIVNKLEGKKQKEIAEELNLSINTVESQMGIAYKKLREELKDCLPLFIFLFA
IS
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtggacttcgaacaattttatatcacatggtattcgcgcgcgaaatattttgcgcgc
gaatatgttcattctgaaagtgatgctgagaatattattcaagacgtttttttgcatctg
tacgagaggcgtgatttgatggatgcatatacaaatctgactgcttatctttttacttct
atcaaaaacagatgtttggactatttgcgcaaatgggttcttgaacaagaaactgcacag
ggagtgcaagatgaatttgatatggaacttcggatcaaatatgattctttggagatattt
aatacgcagttttctgatgaaactgatataggagagttgttggacaatgcactccagaaa
cttccggaacgatgtcgcaacatttttatagtgaataagctggaagggaaaaaacaaaaa
gaaattgcagaagaattgaatttgtctatcaataccgtagagtcgcagatgggcattgct
tacaagaaattacgtgaagaattaaaggattgcctgcctctatttatatttttgtttgct
atttcctga
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integrated database retrieval system
