Bacteroides fragilis 638R: BF638R_4311
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Entry
BF638R_4311 CDS
T01691
Symbol
hup4
Name
(GenBank) putative histone-like DNA-binding protein HU4
KO
K03530
DNA-binding protein HU-beta
Organism
bfg
Bacteroides fragilis 638R
Brite
KEGG Orthology (KO) [BR:
bfg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bfg03032
]
BF638R_4311 (hup4)
03036 Chromosome and associated proteins [BR:
bfg03036
]
BF638R_4311 (hup4)
03400 DNA repair and recombination proteins [BR:
bfg03400
]
BF638R_4311 (hup4)
DNA replication proteins [BR:
bfg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BF638R_4311 (hup4)
Chromosome and associated proteins [BR:
bfg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BF638R_4311 (hup4)
DNA repair and recombination proteins [BR:
bfg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BF638R_4311 (hup4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_2
SpaA
HU-CCDC81_bac_1
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
CBW24728
UniProt:
E1WRF4
LinkDB
All DBs
Position
complement(5084466..5084756)
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AA seq
96 aa
AA seq
DB search
MKKIDLIRSIAVKSNLKKEQIAIVVEGVMEAIAEALHQGESVTLVGFGTFEVKERKARKG
YNLSTGEIMTIPGKKTVRFKPGAKMNLEKKHQDTSR
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagattgatttaattagaagtattgctgttaaaagcaatttaaagaaagagcag
attgccattgtggtggaaggtgtgatggaggctattgccgaggcgctacatcagggagaa
tccgtcacattggtaggtttcggaacctttgaagtaaaagagcgcaaagcccgtaaaggt
tataatctgtctacgggagagataatgactattccgggaaaaaagacggtgagattcaaa
ccgggtgcaaagatgaatcttgagaagaagcatcaggatacctcccggtga
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