Butyricimonas faecihominis: F1611_06690
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Entry
F1611_06690 CDS
T09480
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
bfh
Butyricimonas faecihominis
Pathway
bfh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bfh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1611_06690 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bfh03400
]
F1611_06690 (uvrA)
DNA repair and recombination proteins [BR:
bfh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1611_06690 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1611_06690 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
AAA_21
UvrA_inter
UvrA_DNA-bind
AAA_29
nSTAND1
AAA_16
DnaJ_CXXCXGXG
RsgA_GTPase
nSTAND3
AAA_23
Viral_helicase1
AAA_22
MMR_HSR1
cobW
SLFN-g3_helicase
RNA12
Motif
Other DBs
NCBI-ProteinID:
WOF08095
LinkDB
All DBs
Position
complement(1622743..1625505)
Genome browser
AA seq
920 aa
AA seq
DB search
MSKQSIELKGIRVHNLKNINLNIKLNQFVVITGVSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGRLNKPECDYIKGIPPAVAIEQKVNTSNPRSTVGTSTELYDYIKLLYARIGKT
YSPISGEEVKRHSVDDIYSYILEGHTDQTVVIMAKLAETTNENLPLLISQGFSRIKYGDE
FIRISDLIEKNIPVDSSKEMFLVIDRTRINDEKDTVSRIKDSVETALYEGNGTCYIDIDG
VTRSFSNKFEADGIEFQIPTINTFSFNSPIGACPKCEGYGKILGIDEDLVVPNKSLSVYD
DAVMCWRGEKMSEWKHFFVQHAHKINFPVHTPYFELTAKEKDLLWNSENGIYAFFEYLES
KKFKIQNRVMIARYTGKTKCPVCQGTRLKKEATYVKINNHSITELVDMPISELKVYFDNL
QLSEHDKTIAARVLPDIHNRIDFLLDVGLGYLTLNRLSSSLSGGESQRINLATSLGSALV
GSLYILDEPSIGLHSRDTDRLIQVLHRLRDIGNTVVVVEHDEDIIKAADEIIDVGPLAGR
LGGEIVYQGTLKNLKKADTLTADYIYGKKSIPVPAKRRKSNRYILLSGATENNLKNIDVK
IPLGIMTAVTGVSGSGKSTLIKTILVPALKKYYGDYSDCTGSFNRLSGDVDSIHGVEFID
QNPIGKSSRSNPVTYLKAWDDIRKIFADEKLSKLNGFKPAHFSFNVPGGRCEECQGEGII
KVEMQFMADVYLECEHCKGKRFKDEVLEVKYKGLNIYDILEMTVNQAVEFFSSGTSHSER
SIVSKLQKLIDVGLGYIKLGQASSTLSGGESQRVKLAYHLSQENAEPTLFVFDEPTTGLH
FHDIHKLMDSLNALIERGHTVLIIEHNMDVIKCADNIIDLGPEGGNEGGYLVFEGTPEEL
ITCETSYTGKYLAEKLQENK
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcagagcattgagttgaaaggaatacgggttcacaacctgaaaaatataaat
ctgaatatcaagttaaaccagtttgtcgtgattaccggagtttccggaagcggtaaatct
tcactggcttttgacacgttatatgcagaaggacaaagacgttacgtggaaagcttgtct
tcttatgcgcgtcagtttttgggaagattgaacaaaccggaatgtgactacattaaagga
attccgccagccgtggcaatcgagcaaaaagtgaatacctcgaatccacgttcaaccgtg
ggaacatccacggaactttacgattatatcaaactgttgtatgccagaatcggtaaaacc
tactcccctatttcgggtgaagaagttaagcgccatagcgtggatgacatttactcgtat
attctggaagggcataccgatcagacggttgttatcatggcaaaattagccgagacgaca
aatgaaaatcttcctcttttgattagtcaaggattttcgcgaataaaatacggggatgag
tttatacgaatttccgacttgatcgagaaaaatattccggtagactcttcgaaagagatg
tttctcgtgatagaccggacccggataaatgacgagaaagacacggtatcccggatcaag
gattccgttgagacagccctttacgagggaaacggtacttgctacattgatattgatgga
gtaacacgttcgttctcaaataaattcgaggccgatggtatcgaattccaaataccgacc
attaacacgttcagctttaactcccccatcggagcttgtccgaaatgtgagggatacggg
aagatactcgggatcgacgaggatctcgtggtccccaacaaatcattaagtgtttacgat
gatgcggttatgtgttggcggggagaaaaaatgagcgaatggaaacattttttcgtacaa
cacgctcacaagataaattttccggtacataccccttattttgagctgacggccaaggaa
aaagatcttctttggaatagtgaaaacgggatatacgcgttttttgaatacctagagtcc
aaaaagtttaaaatacagaaccgtgtaatgattgcccgatacacgggaaagaccaaatgt
ccggtgtgtcagggaactcgtttgaaaaaagaagccacgtacgtgaaaataaacaatcat
tctatcacggaactcgtggatatgcccatctcggaactgaaagtctattttgacaatctt
cagttatccgaacacgataagacgattgccgcacgagtacttccggatattcataaccgg
attgatttcctgttggatgttggtcttggctacttgacactgaatcgtttatcctcttca
ttatccggtggagagtcgcaacgtatcaatctggcgacctcgttgggttcagctcttgtc
ggttccttgtatatcttggatgagccgagtatcgggttacattcccgggacacggatcgc
ttgatacaggttcttcatcgtcttcgtgatatcggtaacaccgtggtggtagtcgaacat
gacgaggatattattaaagccgcggatgaaattattgatgttggtcccttggccgggaga
ttgggtggagaaatcgtgtaccaaggaacactgaaaaacttgaagaaagcggacactctt
acggcggattatatatatggaaaaaagagtattcctgttccggcaaaaagaagaaaatca
aatcgttacatactcctttccggtgccacagaaaataaccttaagaatattgatgtcaaa
attcctttggggataatgacagccgtgaccggggtcagtgggtcgggtaagagtacattg
atcaaaacgatactggttcccgccttgaaaaaatattatggggattactccgactgtaca
ggaagtttcaaccgcttgagcggggacgtggattctattcatggagtggaatttattgac
cagaatccgattggtaaatcttctcgttctaacccggttacttacctgaaagcgtgggat
gatatacgtaaaatatttgctgacgaaaaattatcgaaattgaacgggttcaaaccagct
catttttctttcaacgtaccgggaggtcgctgtgaagagtgtcagggagaaggaatcatc
aaggtcgagatgcaatttatggcagatgtctacttggaatgtgaacattgtaaaggaaaa
cgtttcaaggatgaagtgctggaagtaaaatacaagggattgaatatatacgatatttta
gagatgaccgtgaaccaagcagttgaatttttctcttccgggacaagtcatagtgagcga
agtatcgttagcaaactgcaaaaattaatcgatgtcggtttgggatatataaaattaggt
caggcatccagcacgttgagtggtggagaaagccagcgagtaaaactggcttaccatctt
agtcaggaaaatgcggaacctacccttttcgtgtttgatgaaccgaccacgggattgcat
tttcatgatattcataaattgatggattctctaaatgccttgatagaacgaggacatacg
gtgttgatcatagaacacaacatggacgtgatcaaatgtgccgataatattatagacttg
ggaccggaaggaggaaatgaaggcgggtatctcgttttcgaagggacaccggaggaattg
ataacgtgtgaaacctcttataccggaaaatatcttgcagaaaaattgcaagaaaataaa
taa
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