Butyricimonas faecihominis: F1611_07655
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Entry
F1611_07655 CDS
T09480
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bfh
Butyricimonas faecihominis
Pathway
bfh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bfh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F1611_07655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bfh03019
]
F1611_07655
03400 DNA repair and recombination proteins [BR:
bfh03400
]
F1611_07655
Enzymes [BR:
bfh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1611_07655
Messenger RNA biogenesis [BR:
bfh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
F1611_07655
DNA repair and recombination proteins [BR:
bfh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F1611_07655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
PheRS_DBD1
Cas3-like_C_2
HTH_Cmi2_C
GntR
Motif
Other DBs
NCBI-ProteinID:
WOF08272
LinkDB
All DBs
Position
complement(1878538..1880448)
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AA seq
636 aa
AA seq
DB search
MTRDIKEILKTYWGYDDFRSLQEETIRSVLDGKDTLALMPTGGGKSLTYQVSGLAMEGVC
LVVTPLIALMKDQVEDLKNRQIPAEAIYTGMRRDRVESIINKCIYDTVKFLYVSPERLYS
ERFREKLRLMNVCLITVDEAHCISQWGYDFRPPYLRIAEVREFFPGVATLALTATATPEV
VEDIQKQLHFSTPNVLSKSFRRENISYVIRDTEAKPLELFNILSKVQGGAIVYVRTRLKA
SSIAAFLNKSGIKSDFYHAGLSSAQRARRQEAWKSGMVPVVVATNAFGMGIDKADVRVVV
HYDVPDSPEAYFQEAGRAGRDGKRAYAVLLSSRAALGGLQKRIDDAFPPKDYILRVYEAL
ANYYQLGEGEGQGRAFEFNLKLFARNFKLNEARVMSAISILEVAGFLGYTTDINSRSRVM
FTVLRDRLYEFETGDPLLERLMVLLMRNYAGIFVQDAYVDEGFLADQLDVTRKVLYDAFI
SLAKRKIIRYVPGDVKPYIVYYQPRLPLSYITLGREAYENRKELFVTKIGAMARYIRDDE
TCRQLLLMEYFGQKEEKPCGICDVCIGKKKRLHREERKSLEEQILQVLAKQNTNIRELVR
QLGEDEEVVIGQVRKLLDEGKIQYVSTLELGITRKS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtgatataaaagagatattaaagacttactggggatatgatgatttccgatcc
ttgcaggaagagactatccgttccgtgctggacgggaaggacacgcttgcccttatgccc
acgggagggggaaagtcgctcacgtaccaagtgtccgggttagcgatggagggcgtctgt
ctggtggtgaccccgttgattgctttgatgaaggatcaagtggaggatttaaagaacagg
cagattccggccgaggcgatctacacggggatgaggcgtgaccgggtggagtcgatcatt
aataaatgtatatatgatacggttaagttcttgtacgtgtcgcccgagcgattgtactcg
gaacggttccgggaaaaattgaggttgatgaacgtgtgtctgattaccgtggatgaagct
cattgtatctcgcaatgggggtatgattttcgtcccccgtacctgcgaatagcggaggta
cgcgaattctttcccggggtggctacccttgcactcacggccacggctaccccggaggtc
gtggaggatattcagaaacagctgcacttttcgaccccgaacgttctctctaaaagtttc
cggcgggaaaatatttcctacgtgatccgggacacggaggccaagccgttggaattattc
aatattttgtctaaggtgcaggggggggcgatcgtgtacgtgcgtacccggttgaaggct
tcttcgattgccgctttcctgaacaagtcggggatcaagtctgacttttatcatgccggg
ttatcttccgcgcagcgggcacgtcggcaggaggcgtggaaaagcgggatggttcccgtg
gtggtggcgacgaacgctttcgggatggggattgataaggcggatgtgcgggtggtggtg
cattatgacgtgccggacagtccggaggcctatttccaagaggcgggacgtgccggacgg
gatggaaaaagggcatacgctgtgttactttccagccgggcagctttgggtggtttacaa
aaacggattgatgatgcttttcccccgaaagattatatattgagggtgtacgaggccttg
gcgaactattatcagttaggtgagggcgagggacagggacgggcgttcgagttcaatttg
aaactgtttgcccgtaattttaaactcaacgaggcgagggtgatgtctgccatcagtatt
ctggaggttgcggggttcttggggtacacgacggatataaattcccgttcccgggtgatg
ttcaccgtgttacgggatcggttgtacgagttcgagacgggtgatcccttgttggaaaga
cttatggttctcctgatgagaaattatgccggaattttcgtgcaggatgcttacgtggac
gaaggtttcttggctgatcagctcgacgtgacacgcaaggtgttgtatgatgcttttatt
tctttggcaaaacgtaagattattcgctacgtgccgggggacgtgaaaccttacatcgtg
tattaccaaccccggttgccattgtcctatatcacgctcgggagggaggcttacgagaac
cggaaggagttgtttgtcacgaagatcggggccatggcccgttatatccgggatgacgaa
acgtgtcgccagcttttgcttatggagtatttcgggcagaaggaagagaagccttgcggg
atatgtgatgtctgtatcgggaagaagaaacggttgcatcgggaagagcggaaaagtctg
gaggaacagattttgcaggtgcttgccaaacagaatacgaatatccgggagttggtgcgt
caattgggtgaggacgaagaagtcgtgatcgggcaagtccggaaattgttggatgaaggg
aaaattcaatatgtttcgaccttggaactggggataacgaggaagtcctaa
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